RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 POMCP01189 267 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 MYL4P12829 197 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 MPP1Q00013 466 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 SNX17Q15036 470 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ZNF423Q2M1K9 1284 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 SH2D4BQ5SQS7 431 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 C4orf22Q6V702 233 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 ARRDC4Q8NCT1 418 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 BTBD9Q96Q07 612 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 CIB1Q99828 191 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 COQ10BQ9H8M1 238 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 XPR1Q9UBH6 696 aa15.55■□□□□ 0.08
CNOT9-208ENST00000542068 DARSP14868 501 aaKnown RBP15.54■□□□□ 0.08
CNOT9-208ENST00000542068 ERCC2P18074 760 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 NFKB1P19838 968 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 LILRA4P59901 499 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 OTOP3Q7RTS5 596 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 FTHL17Q9BXU8 183 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 AP5M1Q9H0R1 490 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 PIGVQ9NUD9 493 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 YJEFN3A6XGL0 299 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 MATN2O00339 956 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 NRP1O14786 923 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 TNFAIP8O95379 198 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 GLDCP23378 1020 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 MFSD10Q14728 455 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 KYAT1Q16773 422 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 FAM187BQ17R55 369 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 MTX3Q5HYI7 312 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 SPANXN3Q5MJ09 141 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 KRT80Q6KB66 452 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 PLEKHH3Q7Z736 793 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 SPATA22Q8NHS9 363 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 KBTBD7Q8WVZ9 684 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 NXNL1Q96CM4 212 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 CHST12Q9NRB3 414 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 HSFX1Q9UBD0 423 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 FZD10Q9ULW2 581 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 IPPQ9Y573 584 aa15.54■□□□□ 0.08
CNOT9-208ENST00000542068 COPG1Q9Y678 874 aaKnown RBP15.54■□□□□ 0.08
CNOT9-208ENST00000542068 TNS1Q9HBL0 1735 aaKnown RBP15.54■□□□□ 0.08
CNOT9-208ENST00000542068 MYBPHLA2RUH7 354 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 GRID2O43424 1007 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 XPOTO43592 962 aaKnown RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 CD4P01730 458 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 CKMT2P17540 419 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PSMC3P17980 439 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PPARGP37231 505 aaPredicted RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 MATKP42679 507 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 INSCQ1MX18 579 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 MARVELD2Q8N4S9 558 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 TTC39CQ8N584 583 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 EXT2Q93063 718 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 DTNBP1Q96EV8 351 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 DCUN1D5Q9BTE7 237 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 SPON1Q9HCB6 807 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 TRPC7Q9HCX4 862 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 RIMS3Q9UJD0 308 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 CASQ2O14958 399 aaPredicted RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 MLNP12872 115 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 YBX3P16989 372 aaKnown RBP eCLIP15.53■□□□□ 0.089e-6■■■□□ 18.1
CNOT9-208ENST00000542068 PTPN3P26045 913 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 SEPT6Q14141 434 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PKDCCQ504Y2 493 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 SLC26A9Q7LBE3 791 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 ZNF410Q86VK4 478 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 FSTL5Q8N475 847 aaPredicted RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 FAM110BQ8TC76 370 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 TMEM79Q9BSE2 394 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 EFCAB1Q9HAE3 211 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 OXSMQ9NWU1 459 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 ZCWPW2A0A1B0GU75 182 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 ARHGEF37A1IGU5 675 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 B3GAT3O94766 335 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 XIAPP98170 497 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PIGGQ5H8A4 983 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 STXBP5Q5T5C0 1151 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 LRRC8EQ6NSJ5 796 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 MAMDC4Q6UXC1 1216 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 NT5DC4Q86YG4 428 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PSTKQ8IV42 348 aaKnown RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PHF21BQ96EK2 531 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 PAAF1Q9BRP4 392 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 CCDC28BQ9BUN5 200 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 TDRKHQ9Y2W6 561 aaKnown RBP15.53■□□□□ 0.08
CNOT9-208ENST00000542068 RAP2CQ9Y3L5 183 aa15.53■□□□□ 0.08
CNOT9-208ENST00000542068 CROCCQ5TZA2 2017 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 SAC3D1A6NKF1 404 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 SLC5A2P31639 672 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 PTPN9P43378 593 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 ITKQ08881 620 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 ZBTB17Q13105 803 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 PPP1R3AQ16821 1122 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 AGKQ53H12 422 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 IPMKQ8NFU5 416 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 NOL11Q9H8H0 719 aaKnown RBP15.52■□□□□ 0.08
CNOT9-208ENST00000542068 PLEKHA5Q9HAU0 1116 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 TBC1D30Q9Y2I9 924 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 LAMA3Q16787 3333 aa15.52■□□□□ 0.08
CNOT9-208ENST00000542068 E7ENX8 843 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms