RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SCP2P22307 547 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 AVPR2P30518 371 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 SLC16A2P36021 539 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 NR1H2P55055 460 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 KRTAP10-11P60412 298 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 ZBTB16Q05516 673 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.48□□□□□ -1.85
USP28-210ENST00000542033 TOMM20Q15388 145 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 PLK5Q496M5 336 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 VWA5B1Q5TIE3 1220 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 CCDC30Q5VVM6 783 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 NAA35Q5VZE5 725 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 TMEM268Q5VZI3 342 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 ITPRIPL1Q6GPH6 555 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 AADACL2Q6P093 401 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 DENND1BQ6P3S1 775 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 AAGABQ6PD74 315 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 FASTKD5Q7L8L6 764 aaKnown RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 FAM9BQ8IZU0 186 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 FAM185AQ8N0U4 392 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 MMP21Q8N119 569 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 SLC25A41Q8N5S1 370 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 NRACQ8N912 160 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 ZNF548Q8NEK5 533 aaPredicted RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 UCMAQ8WVF2 138 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 ST8SIA4Q92187 359 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 NCSTNQ92542 709 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 RRP36Q96EU6 259 aaKnown RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 FAM210AQ96ND0 272 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 PAIP2Q9BPZ3 127 aaKnown RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 ACTR5Q9H9F9 607 aaPredicted RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 Q9N2J8 555 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 FZD3Q9NPG1 666 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 SEMA4BQ9NPR2 832 aaPredicted RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 TBX20Q9UMR3 447 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 ARHGAP26Q9UNA1 814 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 GDAQ9Y2T3 454 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 TTLL3Q9Y4R7 772 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 CFAP65Q6ZU64 1925 aaKnown RBP3.48□□□□□ -1.85
USP28-210ENST00000542033 LY6G6EA0A0G2JKS1 128 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 IGLV5-39A0A0G2JS06 123 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 TMEM272A0A1B0GTI8 110 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 A6NCN8 305 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 A6NNC1 897 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ZNF814B7Z6K7 855 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 H3BNX3 289 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 PEX12O00623 359 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 KLK10O43240 276 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ZBED4O75132 1171 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 TMEM63AO94886 807 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 NDUFB8O95169 186 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 CBX6O95503 412 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ARSAP15289 507 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 MVDP53602 400 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 POLGP54098 1239 aaPredicted RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 CASP6P55212 293 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 DCAF7P61962 342 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 NUCB1Q02818 461 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 BYSLQ13895 437 aaKnown RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 SEMA3AQ14563 771 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 AP5B1Q2VPB7 878 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ENTPD8Q5MY95 495 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ATG16L1Q676U5 607 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ACAD10Q6JQN1 1059 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 COLCA1Q6ZS62 124 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 KDELC2Q7Z4H8 507 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 PIP4P1Q86T03 277 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 TMEM199Q8N511 208 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 ZNF366Q8N895 744 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 SCAIQ8N9R8 606 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 C1orf131Q8NDD1 294 aaKnown RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 CMASQ8NFW8 434 aaPredicted RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 ADAMTS15Q8TE58 950 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 TMEM174Q8WUU8 243 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 STAMQ92783 540 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 SH3KBP1Q96B97 665 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 MASTLQ96GX5 879 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 FRG2BQ96QU4 278 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 REEP2Q9BRK0 252 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 CHCHD6Q9BRQ6 235 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 NPLQ9BXD5 320 aaPredicted RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 AGXT2Q9BYV1 514 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 FRMD8Q9BZ67 464 aaPredicted RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 CTDSP1Q9GZU7 261 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 PAIP1Q9H074 479 aaKnown RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 HIPK3Q9H422 1215 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 SPAG4Q9NPE6 437 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 PNRC2Q9NPJ4 139 aaKnown RBP3.47□□□□□ -1.85
USP28-210ENST00000542033 RNF146Q9NTX7 359 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 NSMCE4AQ9NXX6 385 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 UPB1Q9UBR1 384 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 PCDHA12Q9UN75 941 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 SQORQ9Y6N5 450 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 SLC4A4Q9Y6R1 1079 aa3.47□□□□□ -1.85
USP28-210ENST00000542033 A0A0G2JK05 382 aa3.46□□□□□ -1.86
USP28-210ENST00000542033 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.46□□□□□ -1.86
USP28-210ENST00000542033 VWA3AA6NCI4 1184 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms