RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 C19orf57Q0VDD7 668 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 MAPK8IP2Q13387 824 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 CAMK4Q16566 473 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 BRMS1LQ5PSV4 323 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 TAF3Q5VWG9 929 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 NEK5Q6P3R8 708 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 CRTC1Q6UUV9 634 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 GPR155Q7Z3F1 870 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 BNIPLQ7Z465 357 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 SETD3Q86TU7 594 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 FAM131BQ86XD5 332 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 ZNF548Q8NEK5 533 aaPredicted RBP15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 LGMNQ99538 433 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 SPON2Q9BUD6 331 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 SEMA4CQ9C0C4 833 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 SYNCQ9H7C4 482 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 ASCL3Q9NQ33 180 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 NLGN3Q9NZ94 848 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 FADS3Q9Y5Q0 445 aa15.78■□□□□ 0.12
CLSTN3-213ENST00000541953 RP1P56715 2156 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 SCAMP1O15126 338 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 SRGAP2O75044 1071 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 OR1E1P30953 314 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 CDH5P33151 784 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 KRT9P35527 623 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 ACVRL1P37023 503 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 CCNHP51946 323 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 NEK3P51956 506 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 E2F1Q01094 437 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 HSP90AA4PQ58FG1 418 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 LRRC73Q5JTD7 316 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 FAM102AQ5T9C2 384 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 GUSBP11Q6P575 273 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 KYAT3Q6YP21 454 aaKnown RBP15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 FAM71AQ8IYT1 594 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 RBFAQ8N0V3 343 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 IFI44Q8TCB0 444 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 PGAP3Q96FM1 320 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 CFAP57Q96MR6 1250 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 PPP1R9BQ96SB3 815 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 SLC17A9Q9BYT1 436 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 TM6SF2Q9BZW4 377 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 DYRK4Q9NR20 520 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 NEU3Q9UQ49 428 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 FHOD1Q9Y613 1164 aa15.77■□□□□ 0.12
CLSTN3-213ENST00000541953 GTPBP10A4D1E9 387 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 A6NNZ2 444 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 GOLGA8SH3BPF8 625 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 TK2O00142 265 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 KRT10P13645 584 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 NME1P15531 152 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 ITGB7P26010 798 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 GABRB2P47870 512 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 CLCN6P51797 869 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 EIF2B5Q13144 721 aaKnown RBP15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 CDKN3Q16667 212 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 DEFB133Q30KQ1 61 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 SLC25A52Q3SY17 297 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 MIIPQ5JXC2 388 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 LEKR1Q6ZMV7 388 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 NYAP1Q6ZVC0 841 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 DRC7Q8IY82 874 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 EMC1Q8N766 993 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 NETO2Q8NC67 525 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 CCDC114Q96M63 670 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 ZDHHC6Q9H6R6 413 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 ATP13A1Q9HD20 1204 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 TMEM59LQ9UK28 342 aa15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 FARP1Q9Y4F1 1045 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-213ENST00000541953 SPTY2D1-AS1A0A0U1RR47 76 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 TEX51A0A1B0GUA7 166 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 ILVBLA1L0T0 632 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 IGLON5A6NGN9 336 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM72CH0Y354 149 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 GJB6O95452 261 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 CSF2P04141 144 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 CYP11B1P15538 503 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 ITIH2P19823 946 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 L1CAMP32004 1257 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 DNA2P51530 1060 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 PCBP4P57723 403 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 GNA12Q03113 381 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 PERM1Q5SV97 790 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM72AQ5TYM5 149 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM72DQ6L9T8 149 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 PHLDB2Q86SQ0 1253 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 NOP9Q86U38 636 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM72BQ86X60 149 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM181AQ8N9Y4 354 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 ZNF248Q8NDW4 579 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 FAM81BQ96LP2 452 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 C1orf74Q96LT6 269 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 DEPDC7Q96QD5 511 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 HEPHQ9BQS7 1158 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 RRN3Q9NYV6 651 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 KIAA1468Q9P260 1216 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 STAP1Q9ULZ2 295 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 SATB2Q9UPW6 733 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 HS3ST3A1Q9Y663 406 aa15.75■□□□□ 0.11
CLSTN3-213ENST00000541953 LRRK1Q38SD2 2015 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms