RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 DBX2Q6ZNG2 339 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 CLEC20AQ6ZU45 233 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 ANKS3Q6ZW76 656 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 GAREM2Q75VX8 874 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 TMC3Q7Z5M5 1100 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 OSTM1Q86WC4 334 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 ALLCQ8N6M5 410 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 EMC1Q8N766 993 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 FAM76AQ8TAV0 307 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 RIN3Q8TB24 985 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 SLC35B2Q8TB61 432 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 RAPGEF5Q92565 580 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 HSPH1Q92598 858 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 NT5C3BQ969T7 300 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 EXOC4Q96A65 974 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 PCED1BQ96HM7 432 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 C8orf48Q96LL4 319 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 RNF157Q96PX1 679 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 TMEM109Q9BVC6 243 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 B3GNT5Q9BYG0 378 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 DPH5Q9H2P9 285 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 DPEP3Q9H4B8 488 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 ABCC13Q9NSE7 274 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 PAK5Q9P286 719 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 PCSK1NQ9UHG2 260 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 TPX2Q9ULW0 747 aaKnown RBP8.58□□□□□ -1.04
CHD4-208ENST00000540960 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
CHD4-208ENST00000540960 SNX24Q9Y343 169 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 PCDHB5Q9Y5E4 795 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 BACE2Q9Y5Z0 518 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 TLN1Q9Y490 2541 aaKnown RBP8.58□□□□□ -1.04
CHD4-208ENST00000540960 F8P00451 2351 aa8.58□□□□□ -1.04
CHD4-208ENST00000540960 MYO18AQ92614 2054 aaKnown RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 A0A1B0GTL3 188 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 ESYT3A0FGR9 886 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 GOLGA6CA6NDK9 693 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SGK1O00141 431 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 AP3B1O00203 1094 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SPAG6O75602 509 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SASH3O75995 380 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 RTN3O95197 1032 aaPredicted RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 LTFP02788 710 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 GOLGA6DP0CG33 693 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 JUPP14923 745 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 MX2P20592 715 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 GJA4P35212 333 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 PHBP35232 272 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SERPINB6P35237 376 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 FLT3P36888 993 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SULT1E1P49888 294 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 MAP3K7CLP57077 242 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 DAOAP59103 153 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 EIF3EP60228 445 aaKnown RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 COG7P83436 770 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 ATP11AP98196 1134 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TLE1Q04724 770 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 DEUP1Q05D60 604 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 NR1H3Q13133 447 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SNX1Q13596 522 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 DCAF6Q58WW2 860 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 BRMS1LQ5PSV4 323 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 AGBL2Q5U5Z8 902 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SCARA3Q6AZY7 606 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SLC8B1Q6J4K2 584 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TTC27Q6P3X3 843 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 DARS2Q6PI48 645 aaKnown RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 CENPUQ71F23 418 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 MON1AQ86VX9 555 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TMPRSS12Q86WS5 348 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 LRRC49Q8IUZ0 686 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SFTPA1Q8IWL2 248 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 PPIL6Q8IXY8 311 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 ZCCHC9Q8N567 271 aaKnown RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 SPPL2BQ8TCT7 592 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 UBLCP1Q8WVY7 318 aaPredicted RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 MYLPFQ96A32 169 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 FAF2Q96CS3 445 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SPACA7Q96KW9 195 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 CFAP57Q96MR6 1250 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 NPY6RQ99463 290 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 LGMNQ99538 433 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 CDC6Q99741 560 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 EPAS1Q99814 870 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 SH3GL2Q99962 352 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TRIM31Q9BZY9 425 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 ZCWPW1Q9H0M4 648 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 RETREG1Q9H6L5 497 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 CRTAC1Q9NQ79 661 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 TM7SF3Q9NS93 570 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 OLA1Q9NTK5 396 aaKnown RBP8.57□□□□□ -1.04
CHD4-208ENST00000540960 ZDHHC18Q9NUE0 388 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 HAUS2Q9NVX0 235 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 OBP2AQ9NY56 170 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 GOLGA6AQ9NYA3 693 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 PSD3Q9NYI0 1048 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 GMIPQ9P107 970 aa8.57□□□□□ -1.04
CHD4-208ENST00000540960 HSFX1Q9UBD0 423 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms