RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 C5orf42Q9H799 3197 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 OTOL1A6NHN0 477 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 ERI2A8K979 691 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TRIM24O15164 1050 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TMCC1O94876 653 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 AP2A1O95782 977 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 CD160O95971 181 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 GEMP55040 296 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 DSC2Q02487 901 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 HTR4Q13639 388 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 INO80DQ53TQ3 878 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 CENPUQ71F23 418 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 C12orf40Q86WS4 652 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 AHI1Q8N157 1196 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 PDIK1LQ8N165 341 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TSEN2Q8NCE0 465 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TTC8Q8TAM2 541 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 HLA-CQ95604 372 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 PSKH2Q96QS6 385 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 RBM15Q96T37 977 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 KIAA1549LQ6ZVL6 1849 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 C2CD4DB7Z1M9 353 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 ANHXE9PGG2 379 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 MUSKO15146 869 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 PPFIA2O75334 1257 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TULP3O75386 442 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 MT-CYBP00156 380 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 HSPA9P38646 679 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 NIPAL4Q0D2K0 466 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 SPARCL1Q14515 664 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 GAB4Q2WGN9 574 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 FNBP1LQ5T0N5 605 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 KCTD11Q693B1 232 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 KIAA0907Q7Z7F0 614 aaPredicted RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 IMP4Q96G21 291 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 SERPINB12Q96P63 405 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 SEMA3CQ99985 751 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 MGME1Q9BQP7 344 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 LRRC40Q9H9A6 602 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 SAYSD1Q9NPB0 183 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 GTSE1Q9NYZ3 720 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 SLC25A13Q9UJS0 675 aa16.41■□□□□ 0.22
TRAF3-204ENST00000539721 FCF1Q9Y324 198 aaKnown RBP16.41■□□□□ 0.22
TRAF3-204ENST00000539721 TTC24A2A3L6 582 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 MT-CO1P00395 513 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 CISD3P0C7P0 127 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 POLR2EP19388 210 aaKnown RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 CD86P42081 329 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 CTSOP43234 321 aaPredicted RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 SERPINH1P50454 418 aaKnown RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 SULT2A1Q06520 285 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 SLC20A2Q08357 652 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 PDIA2Q13087 525 aaKnown RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 MTM1Q13496 603 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 GEN1Q17RS7 908 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 MBLAC2Q68D91 279 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 GRAMD4Q6IC98 578 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 ETFBKMTQ8IXQ9 262 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 KLHDC8BQ8IXV7 354 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 MREGQ8N565 214 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 WFIKKN2Q8TEU8 576 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 EXOC2Q96KP1 924 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 TXLNGYQ9BZA5 131 aa16.4■□□□□ 0.22
TRAF3-204ENST00000539721 XAB2Q9HCS7 855 aaKnown RBP16.4■□□□□ 0.22
TRAF3-204ENST00000539721 CXorf51AA0A1B0GTR3 108 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 PMPCBO75439 489 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 SUN1O94901 812 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 GRIA1P42261 906 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 SLC6A11P48066 632 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 PMS2P54278 862 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 RHOAP61586 193 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 MPP3Q13368 585 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 OLIG2Q13516 323 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 BBS9Q3SYG4 887 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 ALG1LQ6GMV1 187 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 ZNF534Q76KX8 674 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 METTL3Q86U44 580 aaKnown RBP16.39■□□□□ 0.21
TRAF3-204ENST00000539721 PRPF39Q86UA1 669 aaKnown RBP16.39■□□□□ 0.21
TRAF3-204ENST00000539721 ADIPOR2Q86V24 386 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 CAND1Q86VP6 1230 aaKnown RBP16.39■□□□□ 0.21
TRAF3-204ENST00000539721 ATP11CQ8NB49 1132 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 IPMKQ8NFU5 416 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 ARRDC2Q8TBH0 407 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 RPL10LQ96L21 214 aaKnown RBP16.39■□□□□ 0.21
TRAF3-204ENST00000539721 PHACTR1Q9C0D0 580 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 BRD9Q9H8M2 597 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 DEC1Q9P2X7 70 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 SLC27A6Q9Y2P4 619 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 TICRRQ7Z2Z1 1910 aa16.39■□□□□ 0.21
TRAF3-204ENST00000539721 K7ERQ8 282 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 EIF3HO15372 352 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAF3-204ENST00000539721 USP12O75317 370 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 AVILO75366 819 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 BANF1O75531 89 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 MMP2P08253 660 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 SRCP12931 536 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 GJA4P35212 333 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 MAGEA4P43358 317 aa16.38■□□□□ 0.21
TRAF3-204ENST00000539721 RGRP47804 291 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms