RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DHRSXQ8N5I4 330 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 HIST1H2ACQ93077 130 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ROBO3Q96MS0 1386 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ATRNO75882 1429 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 A0A087X0B3 334 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SPATA31C2B4DYI2 1134 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 WBP4O75554 376 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PSMB9P28065 219 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RPA3P35244 121 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TIMM50Q3ZCQ8 353 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FGD3Q5JSP0 725 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CES3Q6UWW8 571 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 AGMOQ6ZNB7 445 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 POLNQ7Z5Q5 900 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 HEXDCQ8WVB3 486 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 LRRC19Q9H756 370 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ASB8Q9H765 288 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ATP6V1HQ9UI12 483 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 DCXO43602 365 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 NBNO60934 754 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SMIM10L2AP0DMW4 78 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SMIM10L2BP0DMW5 78 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CCNA2P20248 432 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 UBA1P22314 1058 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RPL14P50914 215 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PPP3CAQ08209 521 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 DGUOKQ16854 277 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 WSCD1Q658N2 575 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ARCQ7LC44 396 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 NET1Q7Z628 596 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SELENOMQ8WWX9 145 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 VMP1Q96GC9 406 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PPP3R2Q96LZ3 170 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SH3GL2Q99962 352 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 MRPL57Q9BQC6 102 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 GLIS2Q9BZE0 524 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FANCEQ9HB96 536 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 POLE3Q9NRF9 147 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ANAPC2Q9UJX6 822 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RGSL1A5PLK6 1076 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 PDE2AO00408 941 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CLOCKO15516 846 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ASGR1P07306 291 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 VAV1P15498 845 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SMIM11AP58511 58 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TNK2Q07912 1038 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 BRMS1LQ5PSV4 323 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 OTUD3Q5T2D3 398 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SH3BP5LQ7L8J4 393 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF605Q86T29 641 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 MTFMTQ96DP5 389 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FAIM2Q9BWQ8 316 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SENP6Q9GZR1 1112 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ZDHHC6Q9H6R6 413 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 VAV3Q9UKW4 847 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SHPRHQ149N8 1683 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 H3BN98 237 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 STX11O75558 287 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TAL1P17542 331 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CD86P42081 329 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CLK3P49761 638 aaKnown RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CRY1Q16526 586 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ZNF549Q6P9A3 640 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 EXOC3L1Q86VI1 746 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 CROCCP3Q8IVE0 287 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 SEMA4DQ92854 862 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RNF145Q96MT1 663 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 RERGLQ9H628 205 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 ASAH2Q9NR71 780 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 FAM198AQ9UFP1 575 aa6.56□□□□□ -1.36
LSAMP-207ENST00000539563 MTF2Q9Y483 593 aaPredicted RBP6.56□□□□□ -1.36
LSAMP-207ENST00000539563 TMEM150BA6NC51 233 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 F8VP50 259 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 NDUFS2O75306 463 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CYP7B1O75881 506 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HYIQ5T013 277 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 STK32CQ86UX6 486 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HELQQ8TDG4 1101 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CD101Q93033 1021 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 DNAJC1Q96KC8 554 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM192AQ9GZU8 254 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GGA2Q9UJY4 613 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TRIM17Q9Y577 477 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 RGPD8O14715 1765 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TBC1D3BA6NDS4 549 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MEIS2O14770 477 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MYL12BO14950 172 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 SPTLC1O15269 473 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TBL1XO60907 577 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CCDC166P0CW27 439 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 HOXB6P17509 224 aaKnown RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ATP5F1P24539 256 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 GSTM5P46439 218 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 DLG4P78352 724 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 ZNHIT3Q15649 155 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 INO80DQ53TQ3 878 aaPredicted RBP6.55□□□□□ -1.36
LSAMP-207ENST00000539563 FAM180AQ6UWF9 173 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 TMEM161BQ8NDZ6 487 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 MIEF2Q96C03 454 aa6.55□□□□□ -1.36
LSAMP-207ENST00000539563 CDRT15Q96T59 188 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms