RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ATP4AP20648 1035 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 TMEM26Q6ZUK4 368 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 SPATA6LQ8N4H0 392 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 TBCDQ9BTW9 1192 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 KRT84Q9NSB2 600 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 ABCC13Q9NSE7 274 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 UBA2Q9UBT2 640 aaPredicted RBP14.71□□□□□ -0.05
CACNB1-206ENST00000539338 MYRFQ9Y2G1 1151 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 HS6ST1O60243 411 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 GSTM1P09488 218 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 GRIA4P48058 902 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 PCBP1Q15365 356 aaKnown RBP eCLIP14.71□□□□□ -0.05
CACNB1-206ENST00000539338 PRAMEF19Q5SWL8 479 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 TMEM86AQ8N2M4 240 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 C6orf203Q9P0P8 240 aaPredicted RBP14.71□□□□□ -0.05
CACNB1-206ENST00000539338 SNX8Q9Y5X2 465 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 CAMTA1Q9Y6Y1 1673 aa14.71□□□□□ -0.05
CACNB1-206ENST00000539338 TSPAN8P19075 237 aa14.71□□□□□ -0.06
CACNB1-206ENST00000539338 IL27RAQ6UWB1 636 aa14.71□□□□□ -0.06
CACNB1-206ENST00000539338 ZNF614Q8N883 585 aa14.71□□□□□ -0.06
CACNB1-206ENST00000539338 KCTD4Q8WVF5 259 aa14.71□□□□□ -0.06
CACNB1-206ENST00000539338 HSFY1Q96LI6 401 aa14.71□□□□□ -0.06
CACNB1-206ENST00000539338 POLR1EQ9GZS1 481 aaKnown RBP14.71□□□□□ -0.06
CACNB1-206ENST00000539338 ZNF839A8K0R7 811 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 COX4I1P13073 169 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 PPP1R26Q5T8A7 1209 aaPredicted RBP14.7□□□□□ -0.06
CACNB1-206ENST00000539338 ANKRD52Q8NB46 1076 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MAGED4Q96JG8 741 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 ZNF670Q9BS34 389 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 HSD3B7Q9H2F3 369 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 CATSPERZQ9NTU4 200 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 SF3B1O75533 1304 aaKnown RBP eCLIP14.7□□□□□ -0.064e-7■■■■■ 133.7
CACNB1-206ENST00000539338 TMEM191CA6NGB0 347 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 FOXO6A8MYZ6 492 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 ITGA2BP08514 1039 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 LTA4HP09960 611 aaKnown RBP14.7□□□□□ -0.06
CACNB1-206ENST00000539338 ALDH9A1P49189 494 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MSLNQ13421 630 aaPredicted RBP14.7□□□□□ -0.06
CACNB1-206ENST00000539338 TPD52L3Q96J77 140 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 GRIP2Q9C0E4 1043 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MCOLN1Q9GZU1 580 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 OSGEPL1Q9H4B0 414 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 LRRC4CQ9HCJ2 640 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MIEF1Q9NQG6 463 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MPP6Q9NZW5 540 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MARCH2Q9P0N8 246 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 CLDN5O00501 218 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 ERBB2P04626 1255 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 SNHG28P0DPA3 235 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 CENPAP49450 140 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 FAM228AQ86W67 206 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 RSPH1Q8WYR4 309 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MTFMTQ96DP5 389 aaKnown RBP14.7□□□□□ -0.06
CACNB1-206ENST00000539338 SYBUQ9NX95 663 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 FAM20BO75063 409 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 CCNE2O96020 404 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 MSH3P20585 1137 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 USP41Q3LFD5 358 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 NET1Q7Z628 596 aaPredicted RBP14.7□□□□□ -0.06
CACNB1-206ENST00000539338 GPSM1Q86YR5 675 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 EID3Q8N140 333 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 INSL6Q9Y581 213 aa14.7□□□□□ -0.06
CACNB1-206ENST00000539338 PTGES3LE9PB15 166 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 SCAMP3O14828 347 aaKnown RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 CCNB1P14635 433 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 SOX6P35712 828 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 RAP1GAP2Q684P5 730 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 TRAF7Q6Q0C0 670 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 ZNF513Q8N8E2 541 aaPredicted RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 BTBD7Q9P203 1132 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 LNPEPQ9UIQ6 1025 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 SLIT3O75094 1523 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 AKAP12Q02952 1782 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 CNOT3O75175 753 aaKnown RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 LCA5LO95447 670 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 RPS7P62081 194 aaKnown RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 MAD2L1Q13257 205 aaPredicted RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 TEAD4Q15561 434 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 OTOP3Q7RTS5 596 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 RBM23Q86U06 439 aaKnown RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 SYTL1Q8IYJ3 562 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 TERB1Q8NA31 727 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 MAF1Q9H063 256 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 TRPC4Q9UBN4 977 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 RABGEF1Q9UJ41 708 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 CAB39Q9Y376 341 aaPredicted RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 C1orf232A0A0U1RR37 186 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 PAPSS1O43252 624 aaPredicted RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 EDF1O60869 148 aaKnown RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 ATG7O95352 703 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 NEK3P51956 506 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 PTPN20Q4JDL3 420 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 C12orf56Q8IXR9 622 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 DHRSXQ8N5I4 330 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 PTGR2Q8N8N7 351 aaPredicted RBP14.69□□□□□ -0.06
CACNB1-206ENST00000539338 ITFG1Q8TB96 612 aa14.69□□□□□ -0.06
CACNB1-206ENST00000539338 BSNDQ8WZ55 320 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms