RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 TMEM145Q8NBT3 493 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 MCEEQ96PE7 176 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 HEPHQ9BQS7 1158 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 DNAI1Q9UI46 699 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 CA5BQ9Y2D0 317 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 APC2O95996 2303 aa22.64■■□□□ 1.21
SCARB1-206ENST00000539320 ITGB7P26010 798 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 RXRGP48443 463 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 GEMIN4P57678 1058 aaKnown RBP22.63■■□□□ 1.21
SCARB1-206ENST00000539320 CARD16Q5EG05 197 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 EFHC2Q5JST6 749 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 TMPRSS7Q7RTY8 843 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 ARHGEF2Q92974 986 aaKnown RBP22.63■■□□□ 1.21
SCARB1-206ENST00000539320 MYOCQ99972 504 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 MAGEB5Q9BZ81 275 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 TM6SF2Q9BZW4 377 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 MAGEH1Q9H213 219 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 ACTL7AQ9Y615 435 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 KNTC1P50748 2209 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 PLXNB3Q9ULL4 1909 aa22.63■■□□□ 1.21
SCARB1-206ENST00000539320 ARID1BQ8NFD5 2236 aaPredicted RBP22.62■■□□□ 1.21
SCARB1-206ENST00000539320 SLC31A1O15431 190 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 PCDH8O95206 1070 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 CD160O95971 181 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 AKT2P31751 481 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 ZNF143P52747 638 aaPredicted RBP22.62■■□□□ 1.21
SCARB1-206ENST00000539320 ZNF284Q2VY69 593 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 CCDC157Q569K6 752 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 SLFN11Q7Z7L1 901 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 KLK6Q92876 244 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 ISG20Q96AZ6 181 aaKnown RBP22.62■■□□□ 1.21
SCARB1-206ENST00000539320 BPIFA3Q9BQP9 254 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 ZDHHC6Q9H6R6 413 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 HPCAL4Q9UM19 191 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 MYO6Q9UM54 1294 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 CFAP47Q6ZTR5 3102 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 TRPM6Q9BX84 2022 aa22.62■■□□□ 1.21
SCARB1-206ENST00000539320 CHD6Q8TD26 2715 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 ENC1O14682 589 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 TEX33O43247 280 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 L1CAMP32004 1257 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 ACAD10Q6JQN1 1059 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 PARS2Q7L3T8 475 aaKnown RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 MCOLN2Q8IZK6 566 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 RTL3Q8N8U3 475 aaKnown RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 BAP1Q92560 729 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 KLHDC7BQ96G42 594 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 CNDP2Q96KP4 475 aaKnown RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 CNPY3Q9BT09 278 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 FZD3Q9NPG1 666 aa22.61■■□□□ 1.21
SCARB1-206ENST00000539320 RTN4Q9NQC3 1192 aaKnown RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 HECAQ9UBI9 543 aaPredicted RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 ZFR2Q9UPR6 939 aaKnown RBP22.61■■□□□ 1.21
SCARB1-206ENST00000539320 ZFHX4Q86UP3 3567 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 SRRM3A6NNA2 597 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 LDOC1O95751 146 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 ADRB3P13945 408 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 DESP17661 470 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 HNRNPA2B1P22626 353 aaKnown RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 EPHB2P29323 1055 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 RPL7AP62424 266 aaKnown RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 POLD3Q15054 466 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 TMEM259Q4ZIN3 620 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 PPP1R15BQ5SWA1 713 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 SFMBT2Q5VUG0 894 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 SEL1L3Q68CR1 1132 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 PPP1R2P3Q6NXS1 205 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 SCYL2Q6P3W7 929 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 DCUN1D2Q6PH85 259 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 PLPP6Q8IY26 295 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 PYROXD2Q8N2H3 581 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 GALNT15Q8N3T1 639 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 RYBPQ8N488 228 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-206ENST00000539320 EID2Q8N6I1 236 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 EPAS1Q99814 870 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 SYT11Q9BT88 431 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 PCDHGA1Q9Y5H4 931 aa22.6■■□□□ 1.21
SCARB1-206ENST00000539320 ANKRD11Q6UB99 2663 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-206ENST00000539320 ZSCAN5CA6NGD5 496 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-206ENST00000539320 SMTNL1A8MU46 457 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 GSRP00390 522 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 THEGLP0DJG4 465 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 AIF1P55008 147 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 BNIP3Q12983 259 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 KIAA1161Q6NSJ0 714 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 FBXL19Q6PCT2 694 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 DHRS13Q6UX07 377 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 KANSL1Q7Z3B3 1105 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 IRF2BP2Q7Z5L9 587 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 ZNF354CQ86Y25 554 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 OR2AP1Q8NGE2 309 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 OR6K2Q8NGY2 324 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 TAS2R14Q9NYV8 317 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 FZD10Q9ULW2 581 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 FADS3Q9Y5Q0 445 aa22.59■■□□□ 1.21
SCARB1-206ENST00000539320 LRRC53A6NM62 1247 aa22.58■■□□□ 1.21
SCARB1-206ENST00000539320 AP1G1O43747 822 aa22.58■■□□□ 1.21
SCARB1-206ENST00000539320 TNFAIP3P21580 790 aa22.58■■□□□ 1.21
SCARB1-206ENST00000539320 SNRPD1P62314 119 aaKnown RBP22.58■■□□□ 1.21
SCARB1-206ENST00000539320 SMAD1Q15797 465 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms