RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 RAB40AQ8WXH6 277 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 COQ8BQ96D53 544 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HVCN1Q96D96 273 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PABPC5Q96DU9 382 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 C8orf49Q96NF6 230 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GBP5Q96PP8 586 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SLC22A12Q96S37 553 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM39BQ9GZU3 492 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MROH8Q9H579 483 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RABEP2Q9H5N1 569 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CDCP1Q9H5V8 836 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RETREG1Q9H6L5 497 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PAPOLBQ9NRJ5 636 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MCM9Q9NXL9 1143 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DDX43Q9NXZ2 648 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SNX8Q9Y5X2 465 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PSAT1Q9Y617 370 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ADGRA2Q96PE1 1338 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 H7C0S8 307 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SMAD9O15198 467 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 KLK10O43240 276 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NUAK1O60285 661 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF500O60304 480 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 RNASEH1O60930 286 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PTP4A3O75365 173 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PMPCBO75439 489 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ERAL1O75616 437 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 URI1O94763 535 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 OAZ2O95190 189 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPANK1O95872 356 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 C1RP00736 705 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 URODP06132 367 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CD63P08962 238 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM191BP0C7N4 346 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ACADMP11310 421 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SKILP12757 684 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SRCP12931 536 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 KCNA5P22460 613 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TYK2P29597 1187 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SERPINA4P29622 427 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC6A6P31641 620 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ABCD1P33897 745 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DIO1P49895 249 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GATMP50440 423 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 PGGT1BP53609 377 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TAS2R50P59544 299 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SSBP2P81877 361 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CYP4A11Q02928 519 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CSTF1Q05048 431 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CALD1Q05682 793 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CXCL9Q07325 125 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DSC1Q08554 894 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 DMWDQ09019 674 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 LRMPQ12912 555 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 BFSP1Q12934 665 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 AP5B1Q2VPB7 878 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ARL13AQ5H913 290 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 EARS2Q5JPH6 523 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 C6orf141Q5SZD1 244 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TREML2Q5T2D2 321 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 L1TD1Q5T7N2 865 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ASPHD1Q5U4P2 390 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TXNDC8Q6A555 127 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TRNP1Q6NT89 227 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 NOTUMQ6P988 496 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 KYAT3Q6YP21 454 aaKnown RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC39A5Q6ZMH5 540 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 LINGO2Q7L985 606 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM74Q86UV6 250 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TRIM73Q86UV7 250 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 AACSQ86V21 672 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 VPS36Q86VN1 386 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CCDC117Q8IWD4 279 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SCN4BQ8IWT1 228 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC15A3Q8IY34 581 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SPARTQ8N0X7 666 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SLC44A3Q8N4M1 653 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 SYT2Q8N9I0 419 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FAM71DQ8N9W8 422 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GSDMBQ8TAX9 411 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 HAS1Q92839 578 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 C3orf49Q96BT1 292 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF653Q96CK0 615 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 VPS50Q96JG6 964 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TMEM68Q96MH6 324 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 GPA33Q99795 319 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 MLPHQ9BV36 600 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 TKTL2Q9H0I9 626 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 IKZF4Q9H2S9 585 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ST6GALNAC4Q9H4F1 302 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ANKEF1Q9NU02 776 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 C5AR2Q9P296 337 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ANKFY1Q9P2R3 1169 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 WNT16Q9UBV4 365 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 CDH7Q9ULB5 785 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 ST3GAL5Q9UNP4 418 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 BAZ1AQ9NRL2 1556 aaPredicted RBP1.12□□□□□ -2.23
HIF1A-204ENST00000539097 FGD5Q6ZNL6 1462 aa1.12□□□□□ -2.23
HIF1A-204ENST00000539097 KANSL1LA0AUZ9 987 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms