RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 BUD23O43709 281 aaKnown RBP14.77□□□□□ -0.04
CDCA3-207ENST00000538862 LTFP02788 710 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 COX4I1P13073 169 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 NCAM1P13591 858 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 DNAJB1P25685 340 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 CCNHP51946 323 aaPredicted RBP14.77□□□□□ -0.04
CDCA3-207ENST00000538862 IRX1P78414 480 aaPredicted RBP14.77□□□□□ -0.04
CDCA3-207ENST00000538862 HNRNPDQ14103 355 aaKnown RBP14.77□□□□□ -0.04
CDCA3-207ENST00000538862 PRPSAP1Q14558 356 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 CERCAMQ5T4B2 595 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 VWA5B1Q5TIE3 1220 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 NAPEPLDQ6IQ20 393 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 NAPRTQ6XQN6 538 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 KLHDC8BQ8IXV7 354 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 NPWQ8N729 165 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 STON2Q8WXE9 905 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 MFSD3Q96ES6 412 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 TEKT5Q96M29 485 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 EPAS1Q99814 870 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 SMOQ99835 787 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 RTKNQ9BST9 563 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 COLEC11Q9BWP8 271 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 YIPF3Q9GZM5 350 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 VCX3BQ9H321 246 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 C20orf96Q9NUD7 363 aaPredicted RBP14.77□□□□□ -0.04
CDCA3-207ENST00000538862 SLC38A7Q9NVC3 462 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 OXSMQ9NWU1 459 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 PDP2Q9P2J9 529 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 ARHGAP26Q9UNA1 814 aa14.77□□□□□ -0.04
CDCA3-207ENST00000538862 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ATP9BO43861 1147 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 AP1G2O75843 785 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 NFKB1P19838 968 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ITGAXP20702 1163 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CACNA2D1P54289 1103 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 SMAD3P84022 425 aaKnown RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 XIAPP98170 497 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CDH17Q12864 832 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ZBTB17Q13105 803 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 USP4Q13107 963 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 KLF10Q13118 480 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 BIRC2Q13490 618 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 SMAD1Q15797 465 aaKnown RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ANO4Q32M45 955 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 DHDDSQ86SQ9 333 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 LINC00523Q86TU6 105 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 FAM35AQ86V20 835 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 SLC25A41Q8N5S1 370 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ADAM32Q8TC27 787 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 PPP2R3CQ969Q6 453 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 AZIN2Q96A70 460 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 IFT43Q96FT9 208 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ATXN7L3BQ96GX2 97 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 VPS39Q96JC1 886 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 SENP8Q96LD8 212 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 GPR22Q99680 433 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CCDC28BQ9BUN5 200 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ILKAPQ9H0C8 392 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 TSPYL2Q9H2G4 693 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 DDIT4Q9NX09 232 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ZDHHC7Q9NXF8 308 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 GLDCP23378 1020 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 GMPRP36959 345 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CXCR3P49682 368 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 RABGGTBP53611 331 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 IRF9Q00978 393 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CCNIQ14094 377 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 DCLRE1AQ6PJP8 1040 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 TMCO2Q7Z6W1 182 aaPredicted RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 DEFB107AQ8IZN7 70 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 PHTF2Q8N3S3 785 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 FBXW8Q8N3Y1 598 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 TDRD5Q8NAT2 981 aaKnown RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 ZMIZ2Q8NF64 920 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 PGLYRP2Q96PD5 576 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 TSGA13Q96PP4 275 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 KIFC1Q9BW19 673 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 WDCPQ9H6R7 721 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CAB39LQ9H9S4 337 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CHRAC1Q9NRG0 131 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 IARS2Q9NSE4 1012 aaKnown RBP14.76□□□□□ -0.05
CDCA3-207ENST00000538862 OR12D3Q9UGF7 316 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 POMPQ9Y244 141 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 RAP2CQ9Y3L5 183 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 SLC4A7Q9Y6M7 1214 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 CHD7Q9P2D1 2997 aa14.76□□□□□ -0.05
CDCA3-207ENST00000538862 NUP205Q92621 2012 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 EYSQ5T1H1 3165 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 E2F8A0AVK6 867 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 ANKRD33BA6NCL7 494 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-207ENST00000538862 SLC22A2O15244 555 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 DCXO43602 365 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 CACNG3O60359 315 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 CXCL10P02778 98 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 AMHP03971 560 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 USP17L7P0C7H9 530 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 POLD2P49005 469 aa14.75□□□□□ -0.05
CDCA3-207ENST00000538862 EPHB1P54762 984 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms