RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ARHGEF3Q9NR81 526 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 TPRKBQ9Y3C4 175 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PIGNO95427 931 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 CCNB1P14635 433 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 RPA3P35244 121 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ALG11Q2TAA5 492 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 GJC2Q5T442 439 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 SNX32Q86XE0 403 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 DSELQ8IZU8 1212 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 LPPQ93052 612 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ACO2Q99798 780 aaKnown RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 SLC39A8Q9C0K1 460 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 GSSP48637 474 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 RPL14P50914 215 aaKnown RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ATP12AP54707 1039 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 OLFM1Q99784 485 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 RIBC2Q9H4K1 309 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 AGRPO00253 132 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 ALADP13716 330 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CLCN5P51795 746 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 POM121L1PQ3SYA9 428 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 KCNK18Q7Z418 384 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 EPS8L1Q8TE68 723 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
SCARB1-205ENST00000538291 KCNMB3Q9NPA1 279 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CLOCKO15516 846 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 MAGEC1O60732 1142 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 KCNH1O95259 989 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 FAM58BPP0C7Q3 252 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 NAA20P61599 178 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 LRRC38Q5VT99 294 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 PAGE2Q7Z2X7 111 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 RERGQ96A58 199 aaPredicted RBP17■□□□□ 0.31
SCARB1-205ENST00000538291 NRDE2Q9H7Z3 1164 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 GCATO75600 419 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 HNRNPH1P31943 449 aaKnown RBP17■□□□□ 0.31
SCARB1-205ENST00000538291 MAMLD1Q13495 774 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CHPFQ8IZ52 775 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 SLC27A5Q9Y2P5 690 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 HLA-DQA2P01906 255 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 ASGR1P07306 291 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 ATP4AP20648 1035 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CRATP43155 626 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 ITGA1P56199 1179 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CAPSQ13938 189 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 RSBN1Q5VWQ0 802 aaPredicted RBP17■□□□□ 0.31
SCARB1-205ENST00000538291 BHLHB9Q6PI77 547 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 PRR23CQ6ZRP0 262 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 C15orf52Q6ZUT6 534 aaKnown RBP17■□□□□ 0.31
SCARB1-205ENST00000538291 ZNF605Q86T29 641 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 SEMA3CQ99985 751 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 REEP1Q9H902 201 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 NEK6Q9HC98 313 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 CHST7Q9NS84 486 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 OR10H1Q9Y4A9 318 aa17■□□□□ 0.31
SCARB1-205ENST00000538291 OR10H2O60403 315 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 ZNF618Q5T7W0 954 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TBCDQ9BTW9 1192 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 VPS45Q9NRW7 570 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 COPG2Q9UBF2 871 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 OR6C75A6NL08 312 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 DLG4P78352 724 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TCHHL1Q5QJ38 904 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 CLIP3Q96DZ5 547 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TSPAN18Q96SJ8 248 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 C1orf232A0A0U1RR37 186 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TPP1O14773 563 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 BUD23O43709 281 aaKnown RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 CXCL14O95715 111 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 CDC25CP30307 473 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 RPL3P39023 403 aaKnown RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TRIQKQ629K1 86 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 ZCCHC23Q6ZST2 131 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TMEM161BQ8NDZ6 487 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 RNASE11Q8TAA1 199 aaKnown RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 PPP1R13LQ8WUF5 828 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 BTBD10Q9BSF8 475 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 TLR10Q9BXR5 811 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 STX11O75558 287 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 RECQL5O94762 991 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-205ENST00000538291 CCDC166P0CW27 439 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 POLD2P49005 469 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 ZFP1Q6P2D0 407 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 BSNDQ8WZ55 320 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 ZNF510Q9Y2H8 683 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 COQ6Q9Y2Z9 468 aa16.99■□□□□ 0.31
SCARB1-205ENST00000538291 DCXO43602 365 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 GLUD1P00367 558 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 ZDHHC13Q8IUH4 622 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 RIMS1Q86UR5 1692 aaKnown RBP16.98■□□□□ 0.31
SCARB1-205ENST00000538291 ADH1CP00326 375 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 TSPAN19P0C672 248 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 ARMC4Q5T2S8 1044 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 PTGR2Q8N8N7 351 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-205ENST00000538291 C9orf16Q9BUW7 83 aa16.98■□□□□ 0.31
SCARB1-205ENST00000538291 SLC12A4Q9UP95 1085 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms