RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 PREBQ9HCU5 417 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 HCFC1R1Q9NWW0 138 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CACNG4Q9UBN1 327 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 FZD10Q9ULW2 581 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 NAALADL1Q9UQQ1 740 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 VPS9D1Q9Y2B5 631 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 WNT6Q9Y6F9 365 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PDCD11Q14690 1871 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TLDC2A0PJX2 215 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CTAGE9A4FU28 777 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RNF225M0QZC1 329 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TSPAN6O43657 245 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 BUB1O43683 1085 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 KDELR3O43731 214 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 KCNJ13O60928 360 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CFHP08603 1231 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ENDOUP21128 410 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 OAS2P29728 719 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 GPR15P49685 360 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 BLKP51451 505 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CCR5P51681 352 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RHOAP61586 193 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CDK16Q00536 496 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 LMAN2Q12907 356 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SETMARQ53H47 684 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 MARC1Q5VT66 337 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RAP1GAP2Q684P5 730 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RFX8Q6ZV50 586 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CCAR2Q8N163 923 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TC2NQ8N9U0 490 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CADM4Q8NFZ8 388 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SLC35G2Q8TBE7 412 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 GPR152Q8TDT2 470 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SLC20A1Q8WUM9 679 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SIPA1Q96FS4 1042 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 FEM1CQ96JP0 617 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SYT11Q9BT88 431 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CALN1Q9BXU9 219 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 POLR1EQ9GZS1 481 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 OSGEPQ9NPF4 335 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CASS4Q9NQ75 786 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ARHGAP20Q9P2F6 1191 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 DKK3Q9UBP4 350 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CROTQ9UKG9 612 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SYNJ2BP-COX16A0A087WUM0 186 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 A0A087X0T9 212 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 C2orf78A6NCI8 922 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 H3BM21 787 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PSMD11O00231 422 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 KRIT1O00522 736 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ATP9BO43861 1147 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CEP104O60308 925 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 OPHN1O60890 802 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 VNN2O95498 520 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 FAM228BP0C875 321 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PRLRP16471 622 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ZNF30P17039 623 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 MIPP30301 263 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 AVPR2P30518 371 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 AKT2P31751 481 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 VIPR2P41587 438 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 LMAN1P49257 510 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ATXN3P54252 364 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 EPHB1P54762 984 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ADKP55263 362 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 USP46P62068 366 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CAV1Q03135 178 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 GPS2Q13227 327 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 SERINC3Q13530 473 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 ARHGEF7Q14155 803 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PTK2BQ14289 1009 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 GRM2Q14416 872 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CDO1Q16878 200 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 MUM1Q2TAK8 710 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 HNRNPA1L2Q32P51 320 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 MAP7D1Q3KQU3 841 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC23Q53EV4 343 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CARD16Q5EG05 197 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TFDP3Q5H9I0 405 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 PITRM1Q5JRX3 1037 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 HGSNATQ68CP4 663 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RNF43Q68DV7 783 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 HEATR6Q6AI08 1181 aaKnown RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CYB5D1Q6P9G0 228 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 USP45Q70EL2 814 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 BPHLQ86WA6 291 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 FAM131BQ86XD5 332 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 LRRC8AQ8IWT6 810 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 BBS7Q8IWZ6 715 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CCDC13Q8IYE1 715 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RYBPQ8N488 228 aaPredicted RBP3.64□□□□□ -1.83
PTPN22-211ENST00000538253 LINC00469Q8N7U9 141 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CCDC89Q8N998 374 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 TTC16Q8NEE8 873 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 RSAD2Q8WXG1 361 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 GABRG3Q99928 467 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 OMDQ99983 421 aa3.64□□□□□ -1.83
PTPN22-211ENST00000538253 CPEB1Q9BZB8 566 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms