RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 UGT1A7Q9HAW7 530 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A10Q9HAW8 530 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 UGT1A8Q9HAW9 530 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 C12orf10Q9HB07 376 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 CHST12Q9NRB3 414 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 BTBD3Q9Y2F9 522 aa5.46□□□□□ -1.53
PTPRD-213ENST00000537002 ATRNL1Q5VV63 1379 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TISP43B9A030 160 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 MRPS14O60783 128 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 USP12O75317 370 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PIGNO95427 931 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TFPTP0C1Z6 253 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PHC1P78364 1004 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 RALGDSQ12967 914 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 BNIP2Q12982 314 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PCSK7Q16549 785 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SPANXN2Q5MJ10 180 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 VWA5B1Q5TIE3 1220 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM179Q6ZVK1 233 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ERO1BQ86YB8 467 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TICAM1Q8IUC6 712 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SVOPQ8N4V2 548 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TOR1AIP2Q8NFQ8 470 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 HELQQ8TDG4 1101 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TXNDC15Q96J42 360 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 APOL2Q9BQE5 337 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 HEPHQ9BQS7 1158 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CDH19Q9H159 772 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM245Q9H330 911 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ST6GALNAC4Q9H4F1 302 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ARMC7Q9H6L4 198 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 GPRC5CQ9NQ84 441 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TRMT13Q9NUP7 481 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ADAM28Q9UKQ2 775 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SPATA2Q9UM82 520 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 IGSF9BQ9UPX0 1349 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 A0A1B0GW55 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 FAM149AA5PLN7 773 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TIPRLO75663 272 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L2P0CJ85 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L3P0CJ86 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L4P0CJ87 422 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L5P0CJ88 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L6P0CJ89 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4L7P0CJ90 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TRAPPC2P0DI81 140 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TRAPPC2BP0DI82 140 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 BMP1P13497 986 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 YBX3P16989 372 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 NAT1P18440 290 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 GARTP22102 1010 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 AKR1D1P51857 326 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PLEKHG4Q58EX7 1191 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CARM1Q86X55 608 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 C19orf18Q8NEA5 215 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TFB1MQ8WVM0 346 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 C12orf43Q96C57 262 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CAMKK2Q96RR4 588 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 NPAS2Q99743 824 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 APOL4Q9BPW4 351 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 VRTNQ9H8Y1 702 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ZNF556Q9HAH1 456 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DUX4Q9UBX2 424 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 STAP1Q9ULZ2 295 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 COPG1Q9Y678 874 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 A3GALT2U3KPV4 340 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 COL5A2P05997 1499 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TYW5A2RUC4 315 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SYNDIG1LA6NDD5 238 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 J3QRK9 145 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 AVILO75366 819 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 LRPAP1P30533 357 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CPOXP36551 454 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 AP3M2P53677 418 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CAMK2BQ13554 666 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PWP1Q13610 501 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 MXD4Q14582 209 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DENND5AQ6IQ26 1287 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TMEM26Q6ZUK4 368 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 LRTOMTQ8WZ04 291 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 FBXL8Q96CD0 374 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SLITRK1Q96PX8 696 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PPP1R10Q96QC0 940 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SIK2Q9H0K1 926 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ZFYVE28Q9HCC9 887 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 RIC8BQ9NVN3 520 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 TNRC6CQ9HCJ0 1690 aaKnown RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 LOC100506127A0A0U1RQW1 187 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SMIM22K7EJ46 135 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 SULT1C4O75897 302 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 RHOBTB1O94844 696 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 PTTG1O95997 202 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 VEGFAP15692 232 aaPredicted RBP5.46□□□□□ -1.54
PTPRD-213ENST00000537002 EPHA3P29320 983 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 CCNIQ14094 377 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 DCLRE1AQ6PJP8 1040 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 NPNTQ6UXI9 565 aa5.46□□□□□ -1.54
PTPRD-213ENST00000537002 ARMCX2Q7L311 632 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms