RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 SPIDRQ14159 915 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CNGA3Q16281 694 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CCDC153Q494R4 210 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SYPL2Q5VXT5 272 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SPRYD7Q5W111 196 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 ARRDC4Q8NCT1 418 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 NDRG1Q92597 394 aaKnown RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 COX4I2Q96KJ9 171 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 KLHL8Q9P2G9 620 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 AP4B1Q9Y6B7 739 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 PTGESO14684 152 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 TPP1O14773 563 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 AP2A1O95782 977 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SERPINE1P05121 402 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 MYL3P08590 195 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 MYL4P12829 197 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 ERCC2P18074 760 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 DNAJB2P25686 324 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 MAP3K7CLP57077 242 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 TPI1P60174 286 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 PDE1CQ14123 709 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 N4BP2L1Q5TBK1 243 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 ITPRIPL1Q6GPH6 555 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 DHRS4L2Q6PKH6 230 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SLC2A7Q6PXP3 512 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 PIWIL2Q8TC59 973 aaKnown RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CERS2Q96G23 380 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SENP8Q96LD8 212 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 OSBPL6Q9BZF3 934 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SYBUQ9NX95 663 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CLEC11AQ9Y240 323 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 A0A1B0GTW7 788 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CCDC195A0A1B0GUA6 201 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 FUOMA2VDF0 154 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 HOXC8P31273 242 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SPRP35270 261 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 NDUFV1P49821 464 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 PITX1P78337 314 aaPredicted RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 RAB41Q5JT25 222 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 PRAMEF19Q5SWL8 479 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 MBLAC2Q68D91 279 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 EFCAB3Q8N7B9 438 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 ISL2Q96A47 359 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 RILPQ96NA2 401 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 CDH9Q9ULB4 789 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 COQ6Q9Y2Z9 468 aa18.22■□□□□ 0.51
RAB40C-203ENST00000535977 FAM32AQ9Y421 112 aaKnown RBP18.22■□□□□ 0.51
RAB40C-203ENST00000535977 SYNJ2BP-COX16A0A087WUM0 186 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 PSMD3O43242 534 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 KLHL2O95198 593 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 GSRP00390 522 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 PTPN3P26045 913 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 TYK2P29597 1187 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 NPY2RP49146 381 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 USP41Q3LFD5 358 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 TMIGD2Q96BF3 282 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 ULBP1Q9BZM6 244 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 COX16Q9P0S2 106 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 CEP350Q5VT06 3117 aa18.21■□□□□ 0.51
RAB40C-203ENST00000535977 M0QZ92 97 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 TRPA1O75762 1119 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 ACAT1P24752 427 aaKnown RBP18.21■□□□□ 0.5
RAB40C-203ENST00000535977 NFKBIAP25963 317 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 SLC1A6P48664 564 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 CRADDP78560 199 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 BCL2A1Q16548 175 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 TCHHL1Q5QJ38 904 aaPredicted RBP18.21■□□□□ 0.5
RAB40C-203ENST00000535977 PGM2L1Q6PCE3 622 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 HDAC11Q96DB2 347 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 WDR6Q9NNW5 1121 aaKnown RBP18.21■□□□□ 0.5
RAB40C-203ENST00000535977 CASS4Q9NQ75 786 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 CHST12Q9NRB3 414 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 EMCNQ9ULC0 261 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 RAB26Q9ULW5 256 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 POMPQ9Y244 141 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 NR2E3Q9Y5X4 410 aa18.21■□□□□ 0.5
RAB40C-203ENST00000535977 FAM58BPP0C7Q3 252 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 THRAP10827 490 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 CDK9P50750 372 aaKnown RBP18.2■□□□□ 0.5
RAB40C-203ENST00000535977 ZNF33AQ06730 810 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 CES4AQ5XG92 561 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 TMEM135Q86UB9 458 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 FAM35AQ86V20 835 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB40C-203ENST00000535977 SREK1Q8WXA9 508 aaKnown RBP18.2■□□□□ 0.5
RAB40C-203ENST00000535977 BIRC8Q96P09 236 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 CYP4F11Q9HBI6 524 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 CDH22Q9UJ99 828 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 TSC2P49815 1807 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 KPNA6O60684 536 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 LTFP02788 710 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 PROCP04070 461 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 MPOP05164 745 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 FYNP06241 537 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 FGF3P11487 239 aaPredicted RBP18.2■□□□□ 0.5
RAB40C-203ENST00000535977 AOC1P19801 751 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 HADHAP40939 763 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 TEDDM1Q5T9Z0 273 aa18.2■□□□□ 0.5
RAB40C-203ENST00000535977 BSPRYQ5W0U4 402 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms