RNA–Protein interactions for RNA: ENST00000534315.5

FOXRED1-218, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 1 (best)

Gene FOXRED1, Length 2,210 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-218ENST00000534315 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 HNRNPCL1O60812 293 aaKnown RBP13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 IGLV3-27P01718 113 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 CPA3P15088 417 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 GABRB3P28472 473 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 ARRB2P32121 409 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 ARCN1P48444 511 aaKnown RBP13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 RENBPP51606 427 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 PGGT1BP53609 377 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 SLC10A7Q0GE19 358 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 ELAVL2Q12926 359 aaKnown RBP13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 SEPT6Q14141 434 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 LONP2Q86WA8 852 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 CCDC117Q8IWD4 279 aaPredicted RBP13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 DENND6AQ8IWF6 608 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 MAGEC3Q8TD91 643 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 ZNF296Q8WUU4 475 aaPredicted RBP13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 PSMG2Q969U7 264 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 NSL1Q96IY1 281 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 TTPALQ9BTX7 342 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 RHOJQ9H4E5 214 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 SP110Q9HB58 689 aa13.83□□□□□ -0.2
FOXRED1-218ENST00000534315 TLR5O60602 858 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 PQBP1O60828 265 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MYCP01106 439 aaPredicted RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 RALBP11234 206 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MPP1Q00013 466 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CTBP1Q13363 440 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ITGA9Q13797 1035 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 KRT72Q14CN4 511 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CNGA3Q16281 694 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ANKS3Q6ZW76 656 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CNTN4Q8IWV2 1026 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 SLC25A41Q8N5S1 370 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 PIWIL2Q8TC59 973 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 AGAP11Q8TF27 550 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 PTCD2Q8WV60 388 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MYEOVQ96EZ4 313 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 IMP4Q96G21 291 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 RPRD1AQ96P16 312 aaPredicted RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 SORT1Q99523 831 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MIPEPQ99797 713 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 EBF4Q9BQW3 602 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 TUBB6Q9BUF5 446 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MRPL9Q9BYD2 267 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MRM3Q9HC36 420 aaKnown RBP13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ZNF212Q9UDV6 495 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CDY1Q9Y6F8 540 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 H7C4K7 107 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ADAM12O43184 909 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 HOXA2O43364 376 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 FKTNO75072 461 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 AHSGP02765 367 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ATF6P18850 670 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 SAT1P21673 171 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 GRK2P25098 689 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CD86P42081 329 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 CSRP3P50461 194 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ITKQ08881 620 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 MARC1Q5VT66 337 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 FAM91A1Q658Y4 838 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 ICE2Q659A1 982 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 NADSYN1Q6IA69 706 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 FATE1Q969F0 183 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 TMEM175Q9BSA9 504 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 UNC93B1Q9H1C4 597 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 TREX1Q9NSU2 369 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 DONSONQ9NYP3 566 aa13.82□□□□□ -0.2
FOXRED1-218ENST00000534315 DRGXA6NNA5 263 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 SLC38A8A6NNN8 435 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 G3V2L1 256 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 PHGDHO43175 533 aaKnown RBP13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 CCDC22O60826 627 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 ZDHHC11BP0C7U3 371 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 CALB2P22676 271 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 HADHAP40939 763 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 DSC2Q02487 901 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 RING1Q06587 406 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 SMARCB1Q12824 385 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 IHHQ14623 411 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 USP10Q14694 798 aaKnown RBP13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 WDR75Q8IWA0 830 aaKnown RBP13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 FAM13CQ8NE31 585 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 TLE6Q9H808 572 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 NMRAL1Q9HBL8 299 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 BPTFQ12830 3046 aa13.81□□□□□ -0.2
FOXRED1-218ENST00000534315 TTC24A2A3L6 582 aaPredicted RBP13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 RAMP2O60895 175 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 MMP2P08253 660 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 RPL17P18621 184 aaKnown RBP13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 SLC8A1P32418 973 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 AVPR1AP37288 418 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 SLC1A2P43004 574 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 NUMBP49757 651 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 KCNQ1P51787 676 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 CCL23P55773 120 aa13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 ABCE1P61221 599 aaKnown RBP13.8□□□□□ -0.2
FOXRED1-218ENST00000534315 E2F5Q15329 346 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms