RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 STAT4Q14765 748 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 IQCB1Q15051 598 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 INAVAQ3KP66 663 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 E4F1Q66K89 784 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 ERN2Q76MJ5 926 aaKnown RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 ZNF571Q7Z3V5 609 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 LUZP1Q86V48 1076 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 NLRP14Q86W24 1093 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TRIM69Q86WT6 500 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 NETO2Q8NC67 525 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 ARHGEF2Q92974 986 aaKnown RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 PPP1R16AQ96I34 528 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 ELF4Q99607 663 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 CDC6Q99741 560 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 EPAS1Q99814 870 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 HEPHQ9BQS7 1158 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 FUCA2Q9BTY2 467 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 CEP44Q9C0F1 390 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 MAGEH1Q9H213 219 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 PREBQ9HCU5 417 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 FZD3Q9NPG1 666 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 PARVAQ9NVD7 372 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 MYO1AQ9UBC5 1043 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 HECAQ9UBI9 543 aaPredicted RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 TPX2Q9ULW0 747 aaKnown RBP10.64□□□□□ -0.71
CAPN1-225ENST00000533704 WASF3Q9UPY6 502 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 WASF2Q9Y6W5 498 aa10.64□□□□□ -0.71
CAPN1-225ENST00000533704 KMT2BQ9UMN6 2715 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 A0A1B0GTQ1 180 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 KRIT1O00522 736 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 DFNA5O60443 496 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ZNF821O75541 412 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 KRT37O76014 449 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FTLP02792 175 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ITGAVP06756 1048 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 PROS1P07225 676 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ATXN1LP0C7T5 689 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 GRK6P43250 576 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ARRB1P49407 418 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 NEK3P51956 506 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 GEMIN4P57678 1058 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 NXPH1P58417 271 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 TPI1P60174 286 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FANCCQ00597 558 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 SCAPQ12770 1279 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 MAMLD1Q13495 774 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 KLHL40Q2TBA0 621 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 TDRD12Q587J7 1177 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 PPP1R15BQ5SWA1 713 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ATXN7L2Q5T6C5 722 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 PPP1R2P3Q6NXS1 205 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FBXL19Q6PCT2 694 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 RAB44Q7Z6P3 723 aaPredicted RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 SLCO6A1Q86UG4 719 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 HORMAD1Q86X24 394 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 RTL3Q8N8U3 475 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 MFSD2AQ8NA29 543 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 CPLX3Q8WVH0 158 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FAM131CQ96AQ9 280 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ZNF653Q96CK0 615 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 SYT11Q9BT88 431 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 DHX35Q9H5Z1 703 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 CATSPERBQ9H7T0 1116 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 ARHGAP20Q9P2F6 1191 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FTSJ1Q9UET6 329 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 CNOT8Q9UFF9 292 aaKnown RBP10.63□□□□□ -0.71
CAPN1-225ENST00000533704 PCSK1NQ9UHG2 260 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 FZD10Q9ULW2 581 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 NEU3Q9UQ49 428 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 DMTF1Q9Y222 760 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 NEUROG3Q9Y4Z2 214 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 KNTC1P50748 2209 aa10.63□□□□□ -0.71
CAPN1-225ENST00000533704 MYLKQ15746 1914 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 RASA4BC9J798 803 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 PRAMEF26H0Y7S4 382 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 DDX3XO00571 662 aaKnown RBP eCLIP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 NEMP1O14524 444 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 RASA4O43374 803 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 KDELR3O43731 214 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 PCDHGA12O60330 932 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 RNF8O76064 485 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 CD160O95971 181 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 ADRB3P13945 408 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 ITGB7P26010 798 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 AKT2P31751 481 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 NUDT1P36639 197 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 UBASH3AP57075 661 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 SNRPD1P62314 119 aaKnown RBP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 NR1I3Q14994 352 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 SEL1L3Q68CR1 1132 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 PARS2Q7L3T8 475 aaKnown RBP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 EID2Q8N6I1 236 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 BAHD1Q8TBE0 780 aaPredicted RBP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 ADAMTS14Q8WXS8 1223 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 HMCESQ96FZ2 354 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 KLHDC7BQ96G42 594 aa10.62□□□□□ -0.71
CAPN1-225ENST00000533704 CELF6Q96J87 481 aaKnown RBP10.62□□□□□ -0.71
CAPN1-225ENST00000533704 VCPIP1Q96JH7 1222 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms