RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 CNGA3Q16281 694 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 USP41Q3LFD5 358 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 SPOUT1Q5T280 376 aaKnown RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 SLC8B1Q6J4K2 584 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 NLRP9Q7RTR0 991 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 PGBD5Q8N414 524 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ITFG2Q969R8 447 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 WBP2Q969T9 261 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 RBBP8Q99708 897 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 CPNE1Q99829 537 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 KIFC1Q9BW19 673 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 FSD1LQ9BXM9 530 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 FBXO6Q9NRD1 293 aaPredicted RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 SIRPGQ9P1W8 387 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 LYPLA1O75608 230 aaPredicted RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 ANXA9O76027 345 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 EFEMP2O95967 443 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 BPGMP07738 259 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 DLDP09622 509 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 DNAJB2P25686 324 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 TARSP26639 723 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 HTR7P34969 479 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 WNT3AP56704 352 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 DEFB103AP81534 67 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 RANBP10Q6VN20 620 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 KLHDC8BQ8IXV7 354 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 TMEM237Q96Q45 408 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 RNF38Q9H0F5 515 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 ACSS2Q9NR19 701 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 BATF3Q9NR55 127 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MTRRQ9UBK8 725 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 CCL22O00626 93 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MUSKO15146 869 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 ITM2AO43736 263 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 CBX6O95503 412 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 AHSGP02765 367 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 KLKB1P03952 638 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MMP2P08253 660 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 CNTFP26441 200 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 RPS24P62847 133 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 IKBKEQ14164 716 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 FASTKD1Q53R41 847 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 GRTP1Q5TC63 336 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MARC1Q5VT66 337 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 FYB2Q5VWT5 728 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 PKN3Q6P5Z2 889 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 LGI2Q8N0V4 545 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 SP110Q9HB58 689 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 CYP4F11Q9HBI6 524 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 PPARGC1AQ9UBK2 798 aaKnown RBP12.11□□□□□ -0.47
CLP1-205ENST00000533682 COL4A6Q14031 1691 aa12.11□□□□□ -0.47
CLP1-205ENST00000533682 MAGEB16A2A368 324 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 DRGXA6NNA5 263 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 AURKAO14965 403 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 COCHO43405 550 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 PLIN3O60664 434 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 DNAJC6O75061 913 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 T-ENOLP0DO92 83 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 HMGA1P17096 107 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 SGSHP51688 502 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 NDST2P52849 883 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 LIMK2P53671 638 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 MPP1Q00013 466 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 MPP3Q13368 585 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 SEPT6Q14141 434 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ZNF460Q14592 562 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 GRM3Q14832 879 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TAF1BQ53T94 588 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 TIGD7Q6NT04 549 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 DENND1CQ8IV53 801 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 KIRREL3Q8IZU9 778 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 TTC16Q8NEE8 873 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 RSRC1Q96IZ7 334 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 TRIM55Q9BYV6 548 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 UNKQ9C0B0 810 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 NACA2Q9H009 215 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 OLA1Q9NTK5 396 aaKnown RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 HEY2Q9UBP5 337 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 HAO1Q9UJM8 370 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 EME2A4GXA9 379 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 C2orf78A6NCI8 922 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 ZNF840PA6NDX5 716 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 RAMP2O60895 175 aa12.1□□□□□ -0.47
CLP1-205ENST00000533682 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
CLP1-205ENST00000533682 GSTA1P08263 222 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms