RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 MAMDC4Q6UXC1 1216 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 CHERPQ8IWX8 916 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 NPWQ8N729 165 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 TOP1MTQ969P6 601 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 EMID1Q96A84 441 aaPredicted RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 ASB9Q96DX5 294 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 PRPF18Q99633 342 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 ACSS2Q9NR19 701 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 HSFX1Q9UBD0 423 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 SUCOQ9UBS9 1254 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 TRPC5OSA6NMA1 111 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 STX16-NPEPL1H3BU86 382 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 DLX3O60479 287 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 RNASEH2AO75792 299 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 RECQL4O94761 1208 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ZNF26P17031 533 aaPredicted RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 NPR3P17342 541 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 MSX2P35548 267 aaPredicted RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 CDH17Q12864 832 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 NAPEPLDQ6IQ20 393 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ARMCX2Q7L311 632 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 CNTN4Q8IWV2 1026 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 PELI3Q8N2H9 469 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 RNF169Q8NCN4 708 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 B3GALNT2Q8NCR0 500 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 IRGQQ8WZA9 623 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 GPR78Q96P69 363 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ADAMTS10Q9H324 1103 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 MROH8Q9H579 483 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 WDR6Q9NNW5 1121 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 MRPL40Q9NQ50 206 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 MRGBPQ9NV56 204 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 GPRC5DQ9NZD1 345 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 THEGQ9P2T0 379 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 C9IYK1 514 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 SDHDO14521 159 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 PSMD3O43242 534 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 ATP6V1B1P15313 513 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 WARSP23381 471 aaKnown RBP16.85■□□□□ 0.29
CTSB-228ENST00000533455 TAF6P49848 677 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 GJA9P57773 515 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 TXNL4AP83876 142 aaKnown RBP16.85■□□□□ 0.29
CTSB-228ENST00000533455 PTK2BQ14289 1009 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 GRIK4Q16099 956 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 UGP2Q16851 508 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 IYDQ6PHW0 289 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 OSTM1Q86WC4 334 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 RNF148Q8N7C7 305 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 DPF3Q92784 378 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 TEKT5Q96M29 485 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 NPAS2Q99743 824 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 APBA2Q99767 749 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 APOL2Q9BQE5 337 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 ANLNQ9NQW6 1124 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 XPR1Q9UBH6 696 aa16.85■□□□□ 0.29
CTSB-228ENST00000533455 TPH1P17752 444 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 GABRB3P28472 473 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 GLRBP48167 497 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 TBC1D25Q3MII6 688 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 MGAT5BQ3V5L5 792 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 TSTD2Q5T7W7 516 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 NOTUMQ6P988 496 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 HFE2Q6ZVN8 426 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 SLC41A1Q8IVJ1 513 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 GALNT4Q8N4A0 578 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 TMA16Q96EY4 203 aaKnown RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 MARK4Q96L34 752 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 ZNF597Q96LX8 424 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 TIMMDC1Q9NPL8 285 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 SARDHQ9UL12 918 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 ACOT9Q9Y305 439 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 PCDHGA7Q9Y5G6 932 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 MYLKQ15746 1914 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 NRCAMQ92823 1304 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 H3BRB1 525 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 I6L893 689 aaPredicted RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 BEST1O76090 585 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 PGK1P00558 417 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 FYNP06241 537 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 PSMC3P17980 439 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 NDUFV1P49821 464 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 ZNF135P52742 658 aaPredicted RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 RAB10P61026 200 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 PSME3P61289 254 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 SV2CQ496J9 727 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 CHSY3Q70JA7 882 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 CATSPER4Q7RTX7 472 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 CEP70Q8NHQ1 597 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 DUS3LQ96G46 650 aaKnown RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 NXF3Q9H4D5 531 aaKnown RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
CTSB-228ENST00000533455 CIDEBQ9UHD4 219 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 FBXW11Q9UKB1 542 aa16.84■□□□□ 0.29
CTSB-228ENST00000533455 RBM47A0AV96 593 aaKnown RBP16.83■□□□□ 0.28
CTSB-228ENST00000533455 CCDC160A6NGH7 325 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms