RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 LYPLAL1Q5VWZ2 237 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 ZCCHC23Q6ZST2 131 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 PRRT2Q7Z6L0 340 aaPredicted RBP14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 CLEC4DQ8WXI8 215 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 TLR10Q9BXR5 811 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 ASB8Q9H765 288 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 AASDHPPTQ9NRN7 309 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 SOHLH2Q9NX45 425 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 PRKAG3Q9UGI9 489 aa14.96□□□□□ -0.02
PCDHA9-202ENST00000532602 SERPINI2O75830 405 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SELPP16109 830 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 STAG3L4Q8TBR4 150 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CAVIN3Q969G5 261 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 NEDD8-MDP1E9PL57 170 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SGTAO43765 313 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ZBTB48P10074 688 aaPredicted RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ACRP10323 421 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 TOP6BLQ8N6T0 577 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 C4orf32Q8N8J7 132 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SPPL2BQ8TCT7 592 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 POMKQ9H5K3 350 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ATAD3AQ9NVI7 634 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CROTQ9UKG9 612 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ADH1CP00326 375 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 IL1BP01584 269 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CYP1A2P05177 515 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC9A9Q8IVB4 645 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 FAM71AQ8IYT1 594 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ELMO1Q92556 727 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SLC39A8Q9C0K1 460 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 PLK2Q9NYY3 685 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 GPSM3Q9Y4H4 160 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 URADA6NGE7 173 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ENO2P09104 434 aaPredicted RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 S100A3P33764 101 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 TTPAP49638 278 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CLCNKBP51801 687 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNHIT3Q15649 155 aaPredicted RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 RAET1GQ6H3X3 334 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 SYT12Q8IV01 421 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 NFKBIEO00221 500 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 FKBP6O75344 327 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 MARCKSL1P49006 195 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 CRHR2Q13324 411 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 TUSC3Q13454 348 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 NOL9Q5SY16 702 aaKnown RBP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 KRT73Q86Y46 540 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 MAF1Q9H063 256 aa14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHA9-202ENST00000532602 LOC102724159A0A0B4J2E5 919 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PHGDHO43175 533 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 FTH1P02794 183 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PSMC3P17980 439 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PWP2Q15269 919 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 MTDHQ86UE4 582 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 FAM35AQ86V20 835 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 ZFP28Q8NHY6 868 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 MYCBPAPQ8TBZ2 947 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 HGH1Q9BTY7 390 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 FAIM2Q9BWQ8 316 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 FBXO6Q9NRD1 293 aaPredicted RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PAPOLBQ9NRJ5 636 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 DDX20Q9UHI6 824 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 ZNHIT2Q9UHR6 403 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 DERAQ9Y315 318 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 OR6A2O95222 327 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 KELP23276 732 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 TMEM154Q6P9G4 183 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 KYAT3Q6YP21 454 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 KIAA2013Q8IYS2 634 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 LMO7Q8WWI1 1683 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 MARSP56192 900 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 TRIM71Q2Q1W2 868 aaKnown RBP14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 C16orf46Q6P387 395 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 AFTPHQ6ULP2 937 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 TRPC4APQ8TEL6 797 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 RPTORQ8N122 1335 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 CCDC154A6NI56 674 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PIAS1O75925 651 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 SNHG28P0DPA3 235 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 CCNB1P14635 433 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 COPZ1P61923 177 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 RCN1Q15293 331 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 ACTRT2Q8TDY3 377 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 ANKRD49Q8WVL7 239 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 CNGB3Q9NQW8 809 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 ADGRA3Q8IWK6 1321 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 CHADO15335 359 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 RGS5O15539 181 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 GCATO75600 419 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 NFKB1P19838 968 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 FASP25445 335 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 PRKCIP41743 596 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 CASP12Q6UXS9 341 aa14.94□□□□□ -0.02
PCDHA9-202ENST00000532602 BDH2Q9BUT1 245 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms