RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CLIC5Q9NZA1 410 aa7.27□□□□□ -1.25
TRIM53CP-201ENST00000531490 LIMA1Q9UHB6 759 aaKnown RBP7.27□□□□□ -1.25
TRIM53CP-201ENST00000531490 RAD54BQ9Y620 910 aa7.27□□□□□ -1.25
TRIM53CP-201ENST00000531490 THADAQ6YHU6 1953 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC12A8A0AV02 714 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PAPSS1O43252 624 aaPredicted RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 STC2O76061 302 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PF4P02776 101 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SETSIPP0DME0 302 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 RALAP11233 206 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 HOXD12P35452 270 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 CLDN6P56747 220 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 POLR2FP61218 127 aaKnown RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 BYSLQ13895 437 aaKnown RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 IQCB1Q15051 598 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 STILQ15468 1287 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SYPL2Q5VXT5 272 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 BTBD8Q5XKL5 378 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 EGFLAMQ63HQ2 1017 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 KLHDC10Q6PID8 442 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 TPGS1Q6ZTW0 290 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMEM110Q86TL2 294 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PASD1Q8IV76 773 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SIX6OS1Q8N1H7 587 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZNF513Q8N8E2 541 aaPredicted RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PIP4K2CQ8TBX8 421 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PIWIL1Q96J94 861 aaKnown RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 RHOVQ96L33 236 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMEM74Q96NL1 305 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 NAP1L5Q96NT1 182 aaPredicted RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 STK33Q9BYT3 514 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 GANQ9H2C0 597 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 TNKS2Q9H2K2 1166 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 NLRC4Q9NPP4 1024 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 CNGB3Q9NQW8 809 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 FAM207AQ9NSI2 230 aaPredicted RBP7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 PLK2Q9NYY3 685 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 MARCH2Q9P0N8 246 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 TBC1D14Q9P2M4 693 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 RASAL2Q9UJF2 1139 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 NAALADL1Q9UQQ1 740 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 BTBD3Q9Y2F9 522 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SIK3Q9Y2K2 1263 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SH3BP1Q9Y3L3 701 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLCO1B1Q9Y6L6 691 aa7.26□□□□□ -1.25
TRIM53CP-201ENST00000531490 MGAQ8IWI9 3026 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 GOLGA4Q13439 2230 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 FAM221AA4D161 298 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 E5RJQ4 531 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 PYCARD-AS1I3L0S3 204 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC9A3R1O14745 358 aaPredicted RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 MSI1O43347 362 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 MED7O43513 233 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 TULP3O75386 442 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 LTFP02788 710 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 PGRP06401 933 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SYPP08247 313 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 PLA2G2AP14555 144 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 HOXB2P14652 356 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 CORO1AP31146 461 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 DEKP35659 375 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 TNFRSF4P43489 277 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZNF165P49910 485 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 PITX1P78337 314 aaPredicted RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 COG7P83436 770 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 BNC1Q01954 994 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 UBXN1Q04323 297 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC14A1Q13336 389 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 HNRNPDQ14103 355 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SYCP1Q15431 976 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 ANO4Q32M45 955 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 C2CD6Q53TS8 623 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 C10orf76Q5T2E6 689 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 TAF3Q5VWG9 929 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 PRAMEF13Q5VWM6 474 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SLC36A4Q6YBV0 504 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 RSRC2Q7L4I2 434 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 TMPRSS7Q7RTY8 843 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 NOP9Q86U38 636 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 DDX42Q86XP3 938 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 RELL1Q8IUW5 271 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 DENND1CQ8IV53 801 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 FMNL3Q8IVF7 1028 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SCML4Q8N228 414 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZCCHC9Q8N567 271 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 MFSD2AQ8NA29 543 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 AGBL5Q8NDL9 886 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 NUP205Q92621 2012 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 ZNF419Q96HQ0 510 aaPredicted RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 FAM81BQ96LP2 452 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 CPXM1Q96SM3 734 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 MIPEPQ99797 713 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 CD248Q9HCU0 757 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 SPHK2Q9NRA0 654 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 ABCC13Q9NSE7 274 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 AGO1Q9UL18 857 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 CLEC4EQ9ULY5 219 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 APOBEC2Q9Y235 224 aaKnown RBP7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 RAI2Q9Y5P3 530 aa7.25□□□□□ -1.25
TRIM53CP-201ENST00000531490 KIAA1549LQ6ZVL6 1849 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms