RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 IFI44Q8TCB0 444 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 KIAA1524Q8TCG1 905 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 NOC3LQ8WTT2 800 aaKnown RBP4.4□□□□□ -1.71
SOX6-214ENST00000531297 GJA10Q969M2 543 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 RGMAQ96B86 450 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 FAM136AQ96C01 138 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 HVCN1Q96D96 273 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 DHTKD1Q96HY7 919 aaPredicted RBP4.4□□□□□ -1.71
SOX6-214ENST00000531297 ACCSQ96QU6 501 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 ADGRE3Q9BY15 652 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 TRIM9Q9C026 710 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.4□□□□□ -1.71
SOX6-214ENST00000531297 TMEM206Q9H813 350 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 BRD9Q9H8M2 597 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 MRPL44Q9H9J2 332 aaKnown RBP4.4□□□□□ -1.71
SOX6-214ENST00000531297 BLOC1S4Q9NUP1 217 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 WWOXQ9NZC7 414 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 PYCARDQ9ULZ3 195 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 PLXNA1Q9UIW2 1896 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 WDR81Q562E7 1941 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 LRRC37A2A6NM11 1700 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 UBE4BO95155 1302 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 SYNRGQ9UMZ2 1314 aa4.4□□□□□ -1.71
SOX6-214ENST00000531297 DOCK3Q8IZD9 2030 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 MGAMO43451 1857 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 KIAA1217Q5T5P2 1943 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 LOXHD1Q8IVV2 1947 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 SMIM35A0A1B0GVV1 85 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 DNM1LO00429 736 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 EIF3DO15371 548 aaKnown RBP eCLIP4.39□□□□□ -1.71
SOX6-214ENST00000531297 CALUO43852 315 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 TLR5O60602 858 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CAND2O75155 1236 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 OFD1O75665 1012 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 GCNT3O95395 438 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 PARNO95453 639 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 GNA14O95837 355 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 PGK1P00558 417 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ASGR1P07306 291 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 GJB1P08034 283 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ZNF286BP0CG31 522 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ATP1A3P13637 1013 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CDK11BP21127 795 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 KLRC1P26715 233 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 MPGP29372 298 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CASP1P29466 404 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CCND3P30281 292 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 PBX1P40424 430 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 NAMPTP43490 491 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 FOXG1P55316 489 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 IGBP1P78318 339 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CCZ1BP86790 482 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CCZ1P86791 482 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 LRRC63Q05C16 580 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 POU5F1BQ06416 359 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 SPAG1Q07617 926 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 COASYQ13057 564 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 TBX2Q13207 712 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 BFSP2Q13515 415 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 GIT2Q14161 759 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 EMC2Q15006 297 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 LRRC41Q15345 812 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 TRIP6Q15654 476 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 KYAT1Q16773 422 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 FILIP1LQ4L180 1135 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 KLHL22Q53GT1 634 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 COBLL1Q53SF7 1204 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 MTHFD1LQ6UB35 978 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CRELD2Q6UXH1 353 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 C1orf186Q6ZWK4 172 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ANO5Q75V66 913 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 MRPL10Q7Z7H8 261 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 NOP9Q86U38 636 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 ZNF410Q86VK4 478 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 KRT73Q86Y46 540 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 HACE1Q8IYU2 909 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 MYOCDQ8IZQ8 938 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 GUF1Q8N442 669 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 AFAP1L2Q8N4X5 818 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 KLHDC9Q8NEP7 349 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 TMIEQ8NEW7 156 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 SPATA3Q8NHX4 192 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 TRIM44Q96DX7 344 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 BICD1Q96G01 975 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ZNF830Q96NB3 372 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 DEFB118Q96PH6 123 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 CTAGE1Q96RT6 745 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 SH2D3AQ9BRG2 576 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 REEP2Q9BRK0 252 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 C16orf70Q9BSU1 422 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 GCOM2Q9BZD3 368 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 BLZF1Q9H2G9 400 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 DHX33Q9H6R0 707 aaKnown RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 STARD7Q9NQZ5 370 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 OLFML3Q9NRN5 406 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 SUCLA2Q9P2R7 463 aaPredicted RBP4.39□□□□□ -1.71
SOX6-214ENST00000531297 SH2B3Q9UQQ2 575 aa4.39□□□□□ -1.71
SOX6-214ENST00000531297 ARHGEF17Q96PE2 2063 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms