RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ADARB1P78563 741 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NEDD8Q15843 81 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SLC9B1Q4ZJI4 515 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ASPRV1Q53RT3 343 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 YIF1BQ5BJH7 314 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 VWA5B1Q5TIE3 1220 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 AGAP6Q5VW22 663 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 KCTD20Q7Z5Y7 419 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PPM1NQ8N819 430 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 LEMD2Q8NC56 503 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 RHOXF1Q8NHV9 184 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 JPH3Q8WXH2 748 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 AGAP4Q96P64 663 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MTMR12Q9C0I1 747 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MUC3BQ9H195 1237 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NECTIN3Q9NQS3 549 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 AGPAT4Q9NRZ5 378 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TBC1D22BQ9NU19 505 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CCM2LQ9NUG4 571 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PAK1IP1Q9NWT1 392 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MTMR4Q9NYA4 1195 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ABI2Q9NYB9 513 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TXNDC16Q9P2K2 825 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TNFRSF10DQ9UBN6 386 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 FRMPD2Q68DX3 1309 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TESPA1A2RU30 521 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SFI1A8K8P3 1242 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 H7C0C1 242 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GAS2O43903 313 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GABARAPO95166 117 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CSPG5O95196 566 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 KCNH1O95259 989 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NDST3O95803 873 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MAPTP10636 758 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SSTR3P32745 418 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GJC1P36383 396 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 BRMS1LQ5PSV4 323 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 RBM48Q5RL73 367 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TATDN1Q6P1N9 297 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NEK5Q6P3R8 708 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 POLNQ7Z5Q5 900 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 LGI2Q8N0V4 545 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NIPA2Q8N8Q9 360 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SLC7A14Q8TBB6 771 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MUL1Q969V5 352 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MAP6Q96JE9 813 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SH2D3AQ9BRG2 576 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 BTBD2Q9BX70 525 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ZC3H12CQ9C0D7 883 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SMYD2Q9NRG4 433 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TMOD3Q9NYL9 352 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TISP43B9A030 160 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ARHGEF15O94989 841 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TRAPPC2P0DI81 140 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TRAPPC2BP0DI82 140 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ANK1P16157 1881 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ALDH7A1P49419 539 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 RPL10AP62906 217 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 GCNT1Q02742 428 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 C1QBPQ07021 282 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FOXD4Q12950 439 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ART3Q13508 389 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 BFSP2Q13515 415 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 DPYSL3Q14195 570 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CYBRD1Q53TN4 286 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 C8orf82Q6P1X6 216 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 BBS12Q6ZW61 710 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 OTOP3Q7RTS5 596 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 VN1R5Q7Z5H4 357 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 GALNT11Q8NCW6 608 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TWNKQ96RR1 684 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 IL12RB2Q99665 862 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 C20orf96Q9NUD7 363 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SEPT10Q9P0V9 454 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 HMGXB4Q9UGU5 601 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF229Q9UJW7 825 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 NAALAD2Q9Y3Q0 740 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CNTNAP2Q9UHC6 1331 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 hCG_2039718K7EN88 272 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 MSH4O15457 936 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 IFNB1P01574 187 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 HOXB1P14653 301 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CKMT2P17540 419 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FGFR3P22607 806 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SERPINB5P36952 375 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ETFBP38117 255 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 NSFP46459 744 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 OR3A3P47888 321 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF132P52740 706 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 MLLT6P55198 1093 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SRP54P61011 504 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 YWHAZP63104 245 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 DGUOKQ16854 277 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ATAD3CQ5T2N8 411 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 RSBN1Q5VWQ0 802 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF544Q6NX49 715 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CRTC3Q6UUV7 619 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms