RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 GPSM3Q9Y4H4 160 aa21.31■■□□□ 1
SMPD1-204ENST00000530395 EPHB6O15197 1021 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 SDC3O75056 442 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 ZNF821O75541 412 aaPredicted RBP21.3■■□□□ 1
SMPD1-204ENST00000530395 CALB1P05937 261 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 KRT3P12035 628 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 UNGP13051 313 aaPredicted RBP21.3■■□□□ 1
SMPD1-204ENST00000530395 JUPP14923 745 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 CCNHP51946 323 aaPredicted RBP21.3■■□□□ 1
SMPD1-204ENST00000530395 MYL5Q02045 173 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 ILKQ13418 452 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 HS1BP3Q53T59 392 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 MANEALQ5VSG8 457 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 KIAA1161Q6NSJ0 714 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 FBXL19Q6PCT2 694 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 FAM174AQ8TBP5 190 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 GPT2Q8TD30 523 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 FAM172AQ8WUF8 416 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 TSC1Q92574 1164 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 TBC1D31Q96DN5 1066 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 SELENOOQ9BVL4 669 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 FZD3Q9NPG1 666 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 TMEM248Q9NWD8 314 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 RAXQ9Y2V3 346 aa21.3■■□□□ 1
SMPD1-204ENST00000530395 FCF1Q9Y324 198 aaKnown RBP21.3■■□□□ 1
SMPD1-204ENST00000530395 TDRD6O60522 2096 aaKnown RBP21.3■■□□□ 1
SMPD1-204ENST00000530395 LGALS16A8MUM7 142 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 ADRB3P13945 408 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 CKMT2P17540 419 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 L1CAMP32004 1257 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 GSCP56915 257 aaPredicted RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 RPS21P63220 83 aaKnown RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 CYP4F3Q08477 520 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 STX1AQ16623 288 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 RAB6CQ53S08 254 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 SEL1L3Q68CR1 1132 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 ZSCAN30Q86W11 494 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 RYBPQ8N488 228 aaPredicted RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 CENPIQ92674 756 aaPredicted RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 ISG20Q96AZ6 181 aaKnown RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 NXPE2Q96DL1 559 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 CALN1Q9BXU9 219 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 RAB6CQ9H0N0 254 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 MAGEH1Q9H213 219 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 ZDHHC6Q9H6R6 413 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 SEPT11Q9NVA2 429 aaKnown RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 KLHL11Q9NVR0 708 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 HECAQ9UBI9 543 aaPredicted RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 LIMA1Q9UHB6 759 aaKnown RBP21.29■■□□□ 1
SMPD1-204ENST00000530395 DNAI1Q9UI46 699 aa21.29■■□□□ 1
SMPD1-204ENST00000530395 MYLKQ15746 1914 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 ANKRD62A6NC57 917 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 GOLGA6L22H0YM25 854 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 RNF103O00237 685 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 RAMP2O60895 175 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 LRIG2O94898 1065 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 GJB6O95452 261 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 PLEKP08567 350 aaPredicted RBP21.28■■□□□ 1
SMPD1-204ENST00000530395 GPD1P21695 349 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 ACVRL1P37023 503 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 HDAC4P56524 1084 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 PTP4A2Q12974 167 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 POLD3Q15054 466 aaPredicted RBP21.28■■□□□ 1
SMPD1-204ENST00000530395 CLEC16AQ2KHT3 1053 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 TMEM259Q4ZIN3 620 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 C19orf48Q6RUI8 117 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 NLRP14Q86W24 1093 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 PHF13Q86YI8 300 aaPredicted RBP21.28■■□□□ 1
SMPD1-204ENST00000530395 PLPP6Q8IY26 295 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 C3orf20Q8ND61 904 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 ARHGEF2Q92974 986 aaKnown RBP21.28■■□□□ 1
SMPD1-204ENST00000530395 NTAN1Q96AB6 310 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 LRIG1Q96JA1 1093 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 FEM1CQ96JP0 617 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 TM6SF2Q9BZW4 377 aa21.28■■□□□ 1
SMPD1-204ENST00000530395 ZFR2Q9UPR6 939 aaKnown RBP21.28■■□□□ 1
SMPD1-204ENST00000530395 A6NNZ2 444 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 AP1G1O43747 822 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 CDK11BP21127 795 aaKnown RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 RFC1P35251 1148 aaPredicted RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 UBXN1Q04323 297 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 MAPK8IP2Q13387 824 aaPredicted RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 HES3Q5TGS1 186 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 GCNT7Q6ZNI0 430 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 PTAR1Q7Z6K3 402 aaPredicted RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 ABI3BPQ7Z7G0 1075 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 DCP2Q8IU60 420 aaKnown RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 CCDC185Q8N715 623 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 OR13H1Q8NG92 308 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 RAB7BQ96AH8 199 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 PCDHB18PQ96TA0 734 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 SLC17A9Q9BYT1 436 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 NDFIP2Q9NV92 336 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 FADS3Q9Y5Q0 445 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 HS3ST3A1Q9Y663 406 aa21.27■■□□□ 1
SMPD1-204ENST00000530395 URB1O60287 2271 aaKnown RBP21.27■■□□□ 1
SMPD1-204ENST00000530395 ATRXP46100 2492 aa21.27■□□□□ 0.99
SMPD1-204ENST00000530395 FAM72CH0Y354 149 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 GSRP00390 522 aa21.26■□□□□ 0.99
SMPD1-204ENST00000530395 DGKAP23743 735 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms