RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 NEDD8-MDP1E9PL57 170 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 J3KR12 359 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 RRP9O43818 475 aaKnown RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TBL1XO60907 577 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 CLDN11O75508 207 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 HOXD9P28356 352 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ACVRL1P37023 503 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 GRIA1P42261 906 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 CBLBQ13191 982 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TDGQ13569 410 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 RNF43Q68DV7 783 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 MAML1Q92585 1016 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ZNF419Q96HQ0 510 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 VPS37BQ9H9H4 285 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 XAB2Q9HCS7 855 aaKnown RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TRPV5Q9NQA5 729 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 VPS18Q9P253 973 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TTLL3Q9Y4R7 772 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 SHROOM3Q8TF72 1996 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 KIF26AQ9ULI4 1882 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 A0A087WUV0 522 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TLDC2A0PJX2 215 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 SMIM23A6NLE4 172 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 HOXC11O43248 304 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 NARSO43776 548 aaKnown RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 NEBLO76041 1014 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ADH5P11766 374 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TYRP14679 529 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ELK3P41970 407 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 MAGEA3P43357 314 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 NR1H3Q13133 447 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 PRPSAP1Q14558 356 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ITPRIPL2Q3MIP1 535 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 CCDC38Q502W7 563 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 DNAJC21Q5F1R6 531 aaKnown RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 KCTD16Q68DU8 428 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 CHST9Q7L1S5 443 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 IGDCC3Q8IVU1 814 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 PALM2Q8IXS6 379 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 AGGF1Q8N302 714 aaeCLIP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 ATP11CQ8NB49 1132 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 EPS8L3Q8TE67 593 aaKnown RBP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 FATE1Q969F0 183 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TMEM109Q9BVC6 243 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 RBM22Q9NW64 420 aaKnown RBP eCLIP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 BCCIPQ9P287 314 aaKnown RBP eCLIP14.65□□□□□ -0.06
TTC39A-216ENST00000530004 TEX264Q9Y6I9 313 aa14.65□□□□□ -0.06
TTC39A-216ENST00000530004 GOLGA6CA6NDK9 693 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 AP2A1O95782 977 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 PEX11BO96011 259 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 HLA-DQB2P05538 268 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 GOLGA6DP0CG33 693 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 SSTR1P30872 391 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 SLCO1A2P46721 670 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 GPX6P59796 221 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 SERINC3Q13530 473 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 HNRNPDQ14103 355 aaKnown RBP14.64□□□□□ -0.07
TTC39A-216ENST00000530004 SPARCL1Q14515 664 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 LONRF1Q17RB8 773 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 GAB4Q2WGN9 574 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 C6orf118Q5T5N4 469 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 LRRC8BQ6P9F7 803 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 CROCCP2Q86T23 111 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 TTC8Q8TAM2 541 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 CSGALNACT1Q8TDX6 532 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 DNASE1L2Q92874 299 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 ARHGEF2Q92974 986 aaKnown RBP14.64□□□□□ -0.07
TTC39A-216ENST00000530004 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 ROPN1BQ9BZX4 212 aaPredicted RBP14.64□□□□□ -0.07
TTC39A-216ENST00000530004 ROPN1Q9HAT0 212 aaPredicted RBP14.64□□□□□ -0.07
TTC39A-216ENST00000530004 GLOD4Q9HC38 313 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 GOLGA6AQ9NYA3 693 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 CLEC4EQ9ULY5 219 aa14.64□□□□□ -0.07
TTC39A-216ENST00000530004 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.63□□□□□ -0.07
TTC39A-216ENST00000530004 A0A0D9SEW6 157 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 RASGRF2O14827 1237 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 CACNG3O60359 315 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 LUC7L3O95232 432 aaKnown RBP14.63□□□□□ -0.07
TTC39A-216ENST00000530004 SRFP11831 508 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 MLNP12872 115 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 PHBP35232 272 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 NUMBP49757 651 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 RENBPP51606 427 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 GNA12Q03113 381 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 IL10RBQ08334 325 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 ZNF177Q13360 481 aaPredicted RBP14.63□□□□□ -0.07
TTC39A-216ENST00000530004 STAT4Q14765 748 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 RNF135Q8IUD6 432 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 MFN1Q8IWA4 741 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.63□□□□□ -0.07
TTC39A-216ENST00000530004 SH2D3CQ8N5H7 860 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.63□□□□□ -0.07
TTC39A-216ENST00000530004 OR7D4Q8NG98 312 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 OR52K2Q8NGK3 314 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 NSMCE1Q8WV22 266 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 LRRC39Q96DD0 335 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 CCDC77Q9BR77 488 aa14.63□□□□□ -0.07
TTC39A-216ENST00000530004 MLPHQ9BV36 600 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms