RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SLC25A28Q96A46 364 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 RNFT2Q96EX2 444 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 UBXN10Q96LJ8 280 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ZNF48Q96MX3 618 aaPredicted RBP6.26□□□□□ -1.41
PCF11-202ENST00000528336 FCRL4Q96PJ5 515 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ACTR5Q9H9F9 607 aaPredicted RBP6.26□□□□□ -1.41
PCF11-202ENST00000528336 UPB1Q9UBR1 384 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 UHRF1BP1LA0JNW5 1464 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
PCF11-202ENST00000528336 ITIH6Q6UXX5 1313 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 CLIP1P30622 1438 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 FHOD3Q2V2M9 1422 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 UACAQ9BZF9 1416 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 SAC3D1A6NKF1 404 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 K7ENM7 598 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 STRNO43815 780 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 CNPP09543 421 aaKnown RBP6.25□□□□□ -1.41
PCF11-202ENST00000528336 WEE2P0C1S8 567 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 CNTFP26441 200 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 SLC16A2P36021 539 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 ALDH7A1P49419 539 aaKnown RBP6.25□□□□□ -1.41
PCF11-202ENST00000528336 SRSF1Q07955 248 aaKnown RBP eCLIP6.25□□□□□ -1.41
PCF11-202ENST00000528336 EFR3AQ14156 821 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 IL13RA2Q14627 380 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 INTS11Q5TA45 600 aaKnown RBP6.25□□□□□ -1.41
PCF11-202ENST00000528336 VWA5B1Q5TIE3 1220 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 ARMC3Q5W041 872 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 DENND1BQ6P3S1 775 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 AAGABQ6PD74 315 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 CYP26C1Q6V0L0 522 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 BRINP3Q76B58 766 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 KDELC2Q7Z4H8 507 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 TMEM199Q8N511 208 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 SLC25A41Q8N5S1 370 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 SCAIQ8N9R8 606 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 NLRP4Q96MN2 994 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 TWNKQ96RR1 684 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 IFT27Q9BW83 186 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 RRN3Q9NYV6 651 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 DHDHQ9UQ10 334 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 CEP162Q5TB80 1403 aa6.25□□□□□ -1.41
PCF11-202ENST00000528336 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 VWA3AA6NCI4 1184 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 INO80B-WBP1J3KQ70 363 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 TULP3O75386 442 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 CBX6O95503 412 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 PSG1P11464 419 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 CD72P21854 359 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 TSPAN7P41732 249 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 SKIV2L2P42285 1042 aaKnown RBP6.24□□□□□ -1.41
PCF11-202ENST00000528336 TMEM268Q5VZI3 342 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 PIM3Q86V86 326 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 GPSM1Q86YR5 675 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 CPOQ8IVL8 374 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 SCARB1Q8WTV0 552 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 NCSTNQ92542 709 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 PDP2Q9P2J9 529 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 PLEKHB1Q9UF11 243 aaPredicted RBP6.24□□□□□ -1.41
PCF11-202ENST00000528336 CDH22Q9UJ99 828 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 TNFRSF18Q9Y5U5 241 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 LRRFIP2Q9Y608 721 aaKnown RBP6.24□□□□□ -1.41
PCF11-202ENST00000528336 ABCC2Q92887 1545 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 FMN1Q68DA7 1419 aa6.24□□□□□ -1.41
PCF11-202ENST00000528336 ABCA8O94911 1581 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 PLB1Q6P1J6 1458 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 A0A0A0MQY5 61 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 TRBV5-7A0A0A0MS05 114 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 TARSL2A2RTX5 802 aaKnown RBP6.23□□□□□ -1.41
PCF11-202ENST00000528336 TMEM247A6NEH6 219 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 TTC36A6NLP5 189 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 C17orf100A8MU93 164 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 H3BNX3 289 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 MTA2O94776 668 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 EPN2O95208 641 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 SYF2O95926 243 aaKnown RBP6.23□□□□□ -1.41
PCF11-202ENST00000528336 CAPN3P20807 821 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 PTPN9P43378 593 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 CLK1P49759 484 aaKnown RBP6.23□□□□□ -1.41
PCF11-202ENST00000528336 TMPRSS3P57727 454 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 ZBED6P86452 979 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 PTGR1Q14914 329 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 PRTGQ2VWP7 1150 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 SPECC1Q5M775 1068 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 ASPHD1Q5U4P2 390 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 AADACL2Q6P093 401 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 DPP10Q8N608 796 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 LRRC57Q8N9N7 239 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 REEP2Q9BRK0 252 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 STN1Q9H668 368 aaKnown RBP6.23□□□□□ -1.41
PCF11-202ENST00000528336 PNRC2Q9NPJ4 139 aaKnown RBP6.23□□□□□ -1.41
PCF11-202ENST00000528336 ZBTB40Q9NUA8 1239 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 CD207Q9UJ71 328 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 SUFUQ9UMX1 484 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 ICKQ9UPZ9 632 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 GDAQ9Y2T3 454 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 SQORQ9Y6N5 450 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 ADCY10Q96PN6 1610 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 CACNA1IQ9P0X4 2223 aa6.23□□□□□ -1.41
PCF11-202ENST00000528336 TMCC1O94876 653 aa6.22□□□□□ -1.41
PCF11-202ENST00000528336 DDAH2O95865 285 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms