RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PRPF39Q86UA1 669 aaKnown RBP33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 NAXDQ8IW45 347 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 GRIN3AQ8TCU5 1115 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 ARRDC3Q96B67 414 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 LRIG1Q96JA1 1093 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 TRIM7Q9C029 511 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 ARHGAP20Q9P2F6 1191 aa33.66■■■□□ 2.98
SSSCA1-205ENST00000527920 A0A1W2PR77 199 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 SH3BP5O60239 455 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 GSRP00390 522 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 CD38P28907 300 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 C21orf59P57076 290 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 TPI1P60174 286 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 ZNF423Q2M1K9 1284 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 ERMARDQ5T6L9 678 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 LAYNQ6UX15 382 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 ERN2Q76MJ5 926 aaKnown RBP33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 SERAC1Q96JX3 654 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 AASDHPPTQ9NRN7 309 aa33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP33.65■■■□□ 2.98
SSSCA1-205ENST00000527920 ITGB7P26010 798 aa33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 DNA2P51530 1060 aa33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 ZNF135P52742 658 aaPredicted RBP33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 INO80DQ53TQ3 878 aaPredicted RBP33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 SLC45A4Q5BKX6 768 aa33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 CPLX3Q8WVH0 158 aa33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 SNRNP25Q9BV90 132 aaKnown RBP33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 XPO4Q9C0E2 1151 aaKnown RBP33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 ACTL7AQ9Y615 435 aa33.64■■■□□ 2.98
SSSCA1-205ENST00000527920 RASA4BC9J798 803 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 RASA4O43374 803 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 PRPSAP2O60256 369 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 LRCH4O75427 683 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 MIPP30301 263 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 HNRNPH3P31942 346 aaKnown RBP33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 PCK1P35558 622 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 SETMARQ53H47 684 aaPredicted RBP33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 KCNT1Q5JUK3 1230 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 OR2AP1Q8NGE2 309 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 PEBP4Q96S96 227 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 TM6SF2Q9BZW4 377 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 CABIN1Q9Y6J0 2220 aa33.63■■■□□ 2.97
SSSCA1-205ENST00000527920 FLRT2O43155 660 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 PCDHGA12O60330 932 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 CBFA2T3O75081 653 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 WNT1P04628 370 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 CCT8P50990 548 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 NEK3P51956 506 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 SNRPD1P62314 119 aaKnown RBP33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 SIM1P81133 766 aaPredicted RBP33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 OVGP1Q12889 678 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 SERINC3Q13530 473 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 SUZ12Q15022 739 aaKnown RBP33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 CYP4V2Q6ZWL3 525 aaPredicted RBP33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 IQCHQ86VS3 1027 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 DHX35Q9H5Z1 703 aaKnown RBP33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 GPATCH2LQ9NWQ4 482 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 MYO1AQ9UBC5 1043 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 PCSK1NQ9UHG2 260 aa33.62■■■□□ 2.97
SSSCA1-205ENST00000527920 PLXNA2O75051 1894 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 RNF103O00237 685 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 CBFA2T2O43439 604 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 NDST2P52849 883 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 MFSD2AQ8NA29 543 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 HMCESQ96FZ2 354 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 TSPY26PQ9H489 355 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 PCOLCE2Q9UKZ9 415 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 WASF3Q9UPY6 502 aa33.61■■■□□ 2.97
SSSCA1-205ENST00000527920 A0A087X0T9 212 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 SPAARA0A1B0GVQ0 90 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 H0Y8X5 98 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 EEF2KO00418 725 aaKnown RBP33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 WNT9AO14904 365 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 BUB1O43683 1085 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 RNGTTO60942 597 aaKnown RBP33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 TMCC1O94876 653 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 FAM228BP0C875 321 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 CASP14P31944 242 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 CA9Q16790 459 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 GLRX5Q86SX6 157 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 HORMAD1Q86X24 394 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 ZNF354CQ86Y25 554 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 CAMK1GQ96NX5 476 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 ZDHHC6Q9H6R6 413 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 LRRC19Q9H756 370 aa33.6■■■□□ 2.97
SSSCA1-205ENST00000527920 CHD8Q9HCK8 2581 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 PRAMEF26H0Y7S4 382 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 AP1G1O43747 822 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 POP4O95707 220 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 MAT2AP31153 395 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 HCAR3P49019 387 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 TRIM14Q14142 442 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 TRIP6Q15654 476 aaKnown RBP33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 ZSCAN30Q86W11 494 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 GDAP1L1Q96MZ0 367 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 KCTD15Q96SI1 283 aaPredicted RBP33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 ELF4Q99607 663 aaPredicted RBP33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 OSBPL1AQ9BXW6 950 aa33.59■■■□□ 2.97
SSSCA1-205ENST00000527920 KLC2Q9H0B6 622 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms