RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 APLP1P51693 650 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PTAR1Q7Z6K3 402 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 PGAM4Q8N0Y7 254 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 ACVR1CQ8NER5 493 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 RAET1EQ8TD07 263 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 ZNF296Q8WUU4 475 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 KBTBD7Q8WVZ9 684 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 CENPIQ92674 756 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-208ENST00000527323 APBA2Q99767 749 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 OXSMQ9NWU1 459 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 ZDHHC2Q9UIJ5 367 aa12.7□□□□□ -0.38
CAPN1-208ENST00000527323 HSPA13P48723 471 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 USP10Q14694 798 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 KCNMB4Q86W47 210 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 PSTKQ8IV42 348 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 UNKQ9C0B0 810 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 FZD10Q9ULW2 581 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 TIMM44O43615 452 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 NELFEP18615 380 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 IGFBP6P24592 240 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 NR1H2P55055 460 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 BST2Q10589 180 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 PRKAA1Q13131 559 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 TMED1Q13445 227 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 MFSD10Q14728 455 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 PCDH20Q8N6Y1 951 aaKnown RBP12.69□□□□□ -0.38
CAPN1-208ENST00000527323 VPS39Q96JC1 886 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 CCT7Q99832 543 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 ZNF696Q9H7X3 374 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 CHRAC1Q9NRG0 131 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 UBP1Q9NZI7 540 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 THEGQ9P2T0 379 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 HSFX1Q9UBD0 423 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 CASP8AP2Q9UKL3 1982 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 CHD7Q9P2D1 2997 aa12.69□□□□□ -0.38
CAPN1-208ENST00000527323 MEIS3P2A8K0S8 358 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 XPO1O14980 1071 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 CSPG5O95196 566 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 PTK2BQ14289 1009 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 EML3Q32P44 896 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 LIPMQ5VYY2 423 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 IQSEC1Q6DN90 963 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 KLC3Q6P597 504 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ATP6V1E2Q96A05 226 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 CNDP1Q96KN2 507 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 DRC3Q9H069 523 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 TRPV6Q9H1D0 765 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 TRMT13Q9NUP7 481 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 PLK2Q9NYY3 685 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 SIP14410 1827 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 EEF2KO00418 725 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 RNASEH2AO75792 299 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 GLUD2P49448 558 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 BCAT1P54687 386 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 PITX1P78337 314 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 HPCAP84074 193 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 GRM3Q14832 879 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ZNF410Q86VK4 478 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ANKRD52Q8NB46 1076 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 KCTD4Q8WVF5 259 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 DLG3Q92796 817 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 KLHL32Q96NJ5 620 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 NME7Q9Y5B8 376 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 USP3Q9Y6I4 520 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 M0QYT0 321 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 GRID2O43424 1007 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 TRMUO75648 421 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 BCAS2O75934 225 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 DPP6P42658 865 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 MATKP42679 507 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ATN1P54259 1190 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 PPIDQ08752 370 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ITGA7Q13683 1181 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 KYAT1Q16773 422 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 IL23RQ5VWK5 629 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 KRT80Q6KB66 452 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 STRADAQ7RTN6 431 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 SPATA6LQ8N4H0 392 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 GTF3C2Q8WUA4 911 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 SGF29Q96ES7 293 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 C11orf84Q9BUA3 381 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 EIF2AQ9BY44 585 aaKnown RBP12.68□□□□□ -0.38
CAPN1-208ENST00000527323 IGSF9Q9P2J2 1179 aa12.68□□□□□ -0.38
CAPN1-208ENST00000527323 ZCWPW2A0A1B0GU75 182 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 DDHD2O94830 711 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 VAPBO95292 243 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 JUNP05412 331 aaKnown RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 APOA4P06727 396 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 ASGR1P07306 291 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 FGFR3P22607 806 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 PCSK6P29122 969 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 GNL1P36915 607 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 MAGEA12P43365 314 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 NUMBP49757 651 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SCNN1BP51168 640 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 AFF1P51825 1210 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms