RNA–Protein interactions for RNA: ENST00000525916.1

CCDC90B-205, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 656 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-205ENST00000525916 SASS6Q6UVJ0 657 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 ERN2Q76MJ5 926 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 DCP2Q8IU60 420 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 SLC35F3Q8IY50 421 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 RBFAQ8N0V3 343 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 CHST14Q8NCH0 376 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 OR2A12Q8NGT7 310 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 FAM174AQ8TBP5 190 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 GRIN3AQ8TCU5 1115 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 RPRD1AQ96P16 312 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 IL12RB2Q99665 862 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 CCDC3Q9BQI4 270 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 FUCA2Q9BTY2 467 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 ANO10Q9NW15 660 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 ANKMY1Q9P2S6 941 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 DACH1Q9UI36 760 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 CTNND2Q9UQB3 1225 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 FARP1Q9Y4F1 1045 aaPredicted RBP12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 HS3ST3A1Q9Y663 406 aa12.77□□□□□ -0.37
CCDC90B-205ENST00000525916 SDK2Q58EX2 2172 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 RELNP78509 3460 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SYNJ2BP-COX16A0A087WUM0 186 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 K7ERQ8 282 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 PLD2O14939 933 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SLC16A3O15427 465 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SPINT1O43278 529 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SART1O43290 800 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 NOBOXO60393 691 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SNAP91O60641 907 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 GJB6O95452 261 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 PAK4O96013 591 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 ITGB2P05107 769 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 RRM1P23921 792 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 RPL34P49207 117 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 CCDC15Q0P6D6 951 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 EIF2B5Q13144 721 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 EIF4EBP2Q13542 120 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 STILQ15468 1287 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 STX1AQ16623 288 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 XKR5Q6UX68 686 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 BEND5Q7L4P6 421 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 JAMLQ86YT9 394 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 ATP11CQ8NB49 1132 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 TMIEQ8NEW7 156 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 LIN37Q96GY3 246 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 CCDC114Q96M63 670 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 PPP1R9BQ96SB3 815 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 PSMB7Q99436 277 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SLC17A9Q9BYT1 436 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 MUC3BQ9H195 1237 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 POPDC2Q9HBU9 364 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 EPB41L5Q9HCM4 733 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 COX16Q9P0S2 106 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 SLC12A6Q9UHW9 1150 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 IPO11Q9UI26 975 aaKnown RBP12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 VANGL2Q9ULK5 521 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 HS3ST2Q9Y278 367 aa12.76□□□□□ -0.37
CCDC90B-205ENST00000525916 TPP1O14773 563 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 SMAD6O43541 496 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 GCATO75600 419 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 AFPP02771 609 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 PRNPP04156 253 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 NTRK1P04629 796 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 HGFP14210 728 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 GPD2P43304 727 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 RABIFP47224 123 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 STX17P56962 302 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 RPS21P63220 83 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 TLE1Q04724 770 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 TYRO3Q06418 890 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 C1orf61Q13536 156 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 AUHQ13825 339 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 KIAA1161Q6NSJ0 714 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 DENND1BQ6P3S1 775 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 C14orf80Q86SX3 495 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 PPM1KQ8N3J5 372 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 FBXO39Q8N4B4 442 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 NAT6Q93015 286 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 PPP1R13BQ96KQ4 1090 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 NT5C1BQ96P26 610 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 ARHGEF17Q96PE2 2063 aaPredicted RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 TRIM62Q9BVG3 475 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 FAM204AQ9H8W3 233 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 APOBEC3BQ9UH17 382 aaKnown RBP12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 PCDHGA7Q9Y5G6 932 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 FLNCQ14315 2725 aa12.75□□□□□ -0.37
CCDC90B-205ENST00000525916 E5RJQ4 531 aa12.74□□□□□ -0.37
CCDC90B-205ENST00000525916 NTN3O00634 580 aaPredicted RBP12.74□□□□□ -0.37
CCDC90B-205ENST00000525916 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
CCDC90B-205ENST00000525916 LEFTY1O75610 366 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms