RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 OR6C68A6NDL8 312 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 DHX16O60231 1041 aaKnown RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 SOX30O94993 753 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 CBX6O95503 412 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 MYZAPP0CAP1 466 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 RXRAP19793 462 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ITGB8P26012 769 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 GRK6P43250 576 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ACTR2P61160 394 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 BIRC2Q13490 618 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 PDCD2Q16342 344 aaPredicted RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 FSCBQ5H9T9 825 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 CBWD5Q5RIA9 395 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ANO1Q5XXA6 986 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ATG9BQ674R7 924 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 FAM83HQ6ZRV2 1179 aaPredicted RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 HERC6Q8IVU3 1022 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 FTSJ3Q8IY81 847 aaKnown RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 ZDHHC23Q8IYP9 409 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 NKAPQ8N5F7 415 aaKnown RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 OR4N2Q8NGD1 307 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 SPPL3Q8TCT6 385 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 SLC35F5Q8WV83 523 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ATOH1Q92858 354 aaPredicted RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 TBC1D20Q96BZ9 403 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 MED30Q96HR3 178 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ZNF333Q96JL9 665 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 PPP1R10Q96QC0 940 aaKnown RBP4.27□□□□□ -1.73
CD44-217ENST00000525348 SLCO5A1Q9H2Y9 848 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 ITM2CQ9NQX7 267 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 CD207Q9UJ71 328 aa4.27□□□□□ -1.73
CD44-217ENST00000525348 C17orf102A2RUQ5 167 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 SAC3D1A6NKF1 404 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 STRNO43815 780 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 TCEA3O75764 348 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 DHRS4L1P0CG22 281 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 RFC1P35251 1148 aaPredicted RBP4.26□□□□□ -1.73
CD44-217ENST00000525348 HNF1BP35680 557 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 SKIV2L2P42285 1042 aaKnown RBP4.26□□□□□ -1.73
CD44-217ENST00000525348 DSCR9P59020 149 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 TRAF3Q13114 568 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 KEAP1Q14145 624 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 SHBQ15464 509 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 ME3Q16798 604 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 GJB7Q6PEY0 223 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 TEX45Q8NA69 505 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 CEP70Q8NHQ1 597 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 GPT2Q8TD30 523 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 NCSTNQ92542 709 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 WDR6Q9NNW5 1121 aaKnown RBP4.26□□□□□ -1.73
CD44-217ENST00000525348 CD93Q9NPY3 652 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 ATP8A2Q9NTI2 1148 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 WNT16Q9UBV4 365 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 DHDHQ9UQ10 334 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 COMMD10Q9Y6G5 202 aa4.26□□□□□ -1.73
CD44-217ENST00000525348 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
CD44-217ENST00000525348 PEX14O75381 377 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 PAPSS2O95340 614 aaPredicted RBP4.25□□□□□ -1.73
CD44-217ENST00000525348 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
CD44-217ENST00000525348 CBSLP0DN79 551 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 ENO3P13929 434 aaPredicted RBP4.25□□□□□ -1.73
CD44-217ENST00000525348 ZNF12P17014 697 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 DCTDP32321 178 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CBSP35520 551 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 SLC18A2Q05940 514 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 OS9Q13438 667 aaPredicted RBP4.25□□□□□ -1.73
CD44-217ENST00000525348 MYBPC2Q14324 1141 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 ASIC2Q16515 512 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 PRAMEF19Q5SWL8 479 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CERS3Q8IU89 383 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CNPY4Q8N129 248 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CLIP4Q8N3C7 705 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 TMEM57Q8N5G2 664 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 MIGA1Q8NAN2 632 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 TMEM163Q8TC26 289 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 MEIS3Q99687 375 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CLSTN3Q9BQT9 956 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 MSTO1Q9BUK6 570 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 SEZ6LQ9BYH1 1024 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 NPFFR1Q9GZQ6 430 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 WWOXQ9NZC7 414 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 SELENONQ9NZV5 590 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 PCDHGB3Q9Y5G1 929 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CLDN16Q9Y5I7 305 aa4.25□□□□□ -1.73
CD44-217ENST00000525348 CNTNAP2Q9UHC6 1331 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 UNC13AQ9UPW8 1703 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 FAM157AC9JC47 383 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 VWA5AO00534 786 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 PPP1R3DO95685 299 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 ADAP00813 363 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 NUDT6P53370 316 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 BNC1Q01954 994 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 CTXN3Q4LDR2 81 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 TDRD12Q587J7 1177 aaKnown RBP4.24□□□□□ -1.73
CD44-217ENST00000525348 C8orf82Q6P1X6 216 aaPredicted RBP4.24□□□□□ -1.73
CD44-217ENST00000525348 DENND1BQ6P3S1 775 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 PDXDC1Q6P996 788 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 RBFAQ8N0V3 343 aa4.24□□□□□ -1.73
CD44-217ENST00000525348 COG8Q96MW5 612 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms