RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	FANCF	Q9NPI8	374 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	ITM2C	Q9NQX7	267 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	PLSCR4	Q9NRQ2	329 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	RTEL1	Q9NZ71	1219 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	STK39	Q9UEW8	545 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	PCSK1N	Q9UHG2	260 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	POLH	Q9Y253	713 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	SSX2IP	Q9Y2D8	614 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	ATP23	Q9Y6H3	246 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	TP53BP1	Q12888	1972 aa	Predicted RBP	5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	SVEP1	Q4LDE5	3571 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	ANK1	P16157	1881 aa		5.41	□□□□□ -1.54
PABPC1-223	ENST00000523636	TRDMT1	O14717	391 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	MUSK	O15146	869 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ATG13	O75143	517 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	MT-ND3	P03897	115 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GNAI2	P04899	355 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ALDH2	P05091	517 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CYP17A1	P05093	508 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	C8B	P07358	591 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	PARP1	P09874	1014 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GOLGA8H	P0CJ92	632 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	SFTPC	P11686	197 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	KRT13	P13646	458 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	STMN1	P16949	149 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GJA1	P17302	382 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ABCB4	P21439	1286 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	U2AF2	P26368	475 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	VIPR1	P32241	457 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	HSPA4	P34932	840 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LIFR	P42702	1097 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LSS	P48449	732 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	MCM2	P49736	904 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CLNS1A	P54105	237 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	DRG2	P55039	364 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	DSC1	Q08554	894 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GRIK2	Q13002	908 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CDC16	Q13042	620 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	TUSC3	Q13454	348 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	BLMH	Q13867	455 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ESPL1	Q14674	2120 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LLGL1	Q15334	1064 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	TAF12	Q16514	161 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	SKIDA1	Q1XH10	827 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	KIF26B	Q2KJY2	2108 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	QRICH1	Q2TAL8	776 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	FKBP15	Q5T1M5	1219 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	TTC22	Q5TAA0	569 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ANO7	Q6IWH7	933 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CNST	Q6PJW8	725 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	FAM47E	Q6ZV65	393 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	USP51	Q70EK9	711 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LPCAT2	Q7L5N7	544 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	KDELC2	Q7Z4H8	507 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	HEATR4	Q86WZ0	1026 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	EPHX4	Q8IUS5	362 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GPR65	Q8IYL9	337 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LINC01465	Q8N7H1	131 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ZNF248	Q8NDW4	579 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	MNS1	Q8NEH6	495 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	C1orf162	Q8NEQ5	155 aa	Predicted RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CEP76	Q8TAP6	659 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	LNX1	Q8TBB1	728 aa	Predicted RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	BICD2	Q8TD16	824 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	SETD7	Q8WTS6	366 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CPA5	Q8WXQ8	436 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	DLG3	Q92796	817 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	CNOT6L	Q96LI5	555 aa	Known RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	GSDMA	Q96QA5	445 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	NCAPG	Q9BPX3	1015 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	TREX2	Q9BQ50	279 aa	Predicted RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	TMEM47	Q9BQJ4	181 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	APOL6	Q9BWW8	343 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	RNF38	Q9H0F5	515 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	SMARCAD1	Q9H4L7	1026 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	ZWILCH	Q9H900	591 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	5.4	□□□□□ -1.54	2e-19	■■■□□ 19.1
PABPC1-223	ENST00000523636	MIOS	Q9NXC5	875 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	B3GALT1	Q9Y5Z6	326 aa		5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.4	□□□□□ -1.54
PABPC1-223	ENST00000523636	MYH9	P35579	1960 aa	Known RBP	5.4	□□□□□ -1.55
PABPC1-223	ENST00000523636	COL27A1	Q8IZC6	1860 aa	Predicted RBP	5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636		A0A0B4J203	849 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636		A6NLC8	198 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	ZNF891	A8MT65	544 aa	Predicted RBP	5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636		H7C0S8	307 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	SGTA	O43765	313 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	KIAA0754	O94854	1291 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	LUC7L3	O95232	432 aa	Known RBP	5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	C22orf31	O95567	290 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	POMC	P01189	267 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	HRG	P04196	525 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	APOA4	P06727	396 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	DHRS4L1	P0CG22	281 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	XBP1	P17861	261 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	STIP1	P31948	543 aa	Known RBP	5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	ABCD1	P33897	745 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	UCN	P55089	124 aa		5.39	□□□□□ -1.55
PABPC1-223	ENST00000523636	EVC	P57679	992 aa		5.39	□□□□□ -1.55

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