RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 RAB6CQ9H0N0 254 aa11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 HECAQ9UBI9 543 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 ZFR2Q9UPR6 939 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 FCF1Q9Y324 198 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 NYNRINQ9P2P1 1898 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 URB1O60287 2271 aaKnown RBP11.99□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM72CH0Y354 149 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 TRIM38O00635 465 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SIGLEC6O43699 453 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CD160O95971 181 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 PLEKP08567 350 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 KRT3P12035 628 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ADRB3P13945 408 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 DGKAP23743 735 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 RFC1P35251 1148 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ACVRL1P37023 503 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 NSFP46459 744 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 MAPKAPK2P49137 400 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CCNHP51946 323 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CLDN6P56747 220 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 GEMIN4P57678 1058 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CLDN2P57739 230 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 RPS21P63220 83 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 TARDBPQ13148 414 aaKnown RBP eCLIP11.98□□□□□ -0.494e-6■■■■□ 19.5
CTNNA1-237ENST00000523275 ZNF211Q13398 564 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SYCP1Q15431 976 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 COL28A1Q2UY09 1125 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 PROX2Q3B8N5 592 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 HES3Q5TGS1 186 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM72AQ5TYM5 149 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 MANEALQ5VSG8 457 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SEL1L3Q68CR1 1132 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM72DQ6L9T8 149 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 KIAA1161Q6NSJ0 714 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 STRADAQ7RTN6 431 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM72BQ86X60 149 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 DCP2Q8IU60 420 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ANKRD20A12PQ8NF67 263 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM174AQ8TBP5 190 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CENPIQ92674 756 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ARHGEF2Q92974 986 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 CALN1Q9BXU9 219 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SLC17A9Q9BYT1 436 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 MAGEH1Q9H213 219 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 FZD3Q9NPG1 666 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SCUBE2Q9NQ36 999 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 NDFIP2Q9NV92 336 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 TMEM248Q9NWD8 314 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ADAM22Q9P0K1 906 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 DNAI1Q9UI46 699 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 HPCAL4Q9UM19 191 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 SIK3Q9Y2K2 1263 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 HS3ST3A1Q9Y663 406 aa11.98□□□□□ -0.49
CTNNA1-237ENST00000523275 ARID1BQ8NFD5 2236 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 AP1G1O43747 822 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 LRIG2O94898 1065 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 GJB6O95452 261 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 PAK4O96013 591 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 UNGP13051 313 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 HOXB3P14651 431 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 ACP1P24666 158 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 COPB1P53618 953 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 HDAC4P56524 1084 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 E2F1Q01094 437 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 PTP4A2Q12974 167 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 SGCGQ13326 291 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 CLEC16AQ2KHT3 1053 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 WDR59Q6PJI9 974 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 SASS6Q6UVJ0 657 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 GCNT7Q6ZNI0 430 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 RBM43Q6ZSC3 357 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 Q6ZSR6 202 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 PDZD3Q86UT5 571 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 NLRP14Q86W24 1093 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 PHF13Q86YI8 300 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 RYBPQ8N488 228 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 CCDC185Q8N715 623 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 OR4C6Q8NH72 309 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 FAM172AQ8WUF8 416 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 NXPE2Q96DL1 559 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 TBC1D31Q96DN5 1066 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 IFT43Q96FT9 208 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 LRIG1Q96JA1 1093 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 MAGEB5Q9BZ81 275 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 TM6SF2Q9BZW4 377 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 ZDHHC6Q9H6R6 413 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 UCKL1Q9NWZ5 548 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 FADS3Q9Y5Q0 445 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 ACTL7AQ9Y615 435 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 ITPR1Q14643 2758 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 FREM2Q5SZK8 3169 aa11.97□□□□□ -0.49
CTNNA1-237ENST00000523275 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.49
CTNNA1-237ENST00000523275 A0A087WV48 116 aa11.96□□□□□ -0.49
CTNNA1-237ENST00000523275 NEMP2A6NFY4 417 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms