RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 HDAC8Q9BY41 377 aa16.54■□□□□ 0.24
CLN8-206ENST00000523237 WASF2Q9Y6W5 498 aa16.54■□□□□ 0.24
CLN8-206ENST00000523237 ZSCAN5CA6NGD5 496 aaPredicted RBP16.53■□□□□ 0.24
CLN8-206ENST00000523237 PRAMEF26H0Y7S4 382 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 YKT6O15498 198 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 CREB3O43889 395 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 MAGEC1O60732 1142 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 PROS1P07225 676 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 GZMAP12544 262 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ITGB7P26010 798 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 PRKCIP41743 596 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ARRB1P49407 418 aaPredicted RBP16.53■□□□□ 0.24
CLN8-206ENST00000523237 NEK3P51956 506 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 NXPH1P58417 271 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 IL9RQ01113 521 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 OGDHQ02218 1023 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 OVGP1Q12889 678 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 MAMLD1Q13495 774 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 STAT4Q14765 748 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 FIGNQ5HY92 759 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 PLEKHA7Q6IQ23 1121 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ZNF571Q7Z3V5 609 aaPredicted RBP16.53■□□□□ 0.24
CLN8-206ENST00000523237 IQCHQ86VS3 1027 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ZNF354CQ86Y25 554 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 PLPP6Q8IY26 295 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 OXR1Q8N573 874 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ADAMTS14Q8WXS8 1223 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 TM6SF2Q9BZW4 377 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 TTYH3Q9C0H2 523 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 CATSPERBQ9H7T0 1116 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 CBX8Q9HC52 389 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 KLK13Q9UKR3 277 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 BTBD3Q9Y2F9 522 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 MSRB2Q9Y3D2 182 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 ACTL7AQ9Y615 435 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 CEP295Q9C0D2 2601 aa16.53■□□□□ 0.24
CLN8-206ENST00000523237 COL5A1P20908 1838 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 A0A1W2PQU0 124 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 C1QTNF9BB2RNN3 333 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 RNF103O00237 685 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 FGF10O15520 208 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 ATMINO43313 823 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 KDELR3O43731 214 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 FTLP02792 175 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 C1QTNF9P0C862 333 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 PTMSP20962 102 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 PSMA2P25787 234 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 HTR7P34969 479 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 YBEYP58557 167 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 SNRPD1P62314 119 aaKnown RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 PRAMEF14Q5SWL7 426 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 E4F1Q66K89 784 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 FBXL19Q6PCT2 694 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 LUZP1Q86V48 1076 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 HORMAD1Q86X24 394 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 RYBPQ8N488 228 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 PNPLA1Q8N8W4 532 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 ZDHHC6Q9H6R6 413 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 ERVMER34-1Q9H9K5 563 aa16.52■□□□□ 0.24
CLN8-206ENST00000523237 HECAQ9UBI9 543 aaPredicted RBP16.52■□□□□ 0.24
CLN8-206ENST00000523237 TRPM6Q9BX84 2022 aa16.52■□□□□ 0.23
CLN8-206ENST00000523237 PTPRBP23467 1997 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 EPG5Q9HCE0 2579 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 WASH4PA8MWX3 477 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 DDX3XO00571 662 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLN8-206ENST00000523237 SLC31A1O15431 190 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 TNFSF14O43557 240 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 BUB1O43683 1085 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 RNF8O76064 485 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 PCDH8O95206 1070 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 GSRP00390 522 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 ITGAVP06756 1048 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 ADRB3P13945 408 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 FANCCQ00597 558 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 SLCO6A1Q86UG4 719 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 OR2AP1Q8NGE2 309 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 CASKIN2Q8WXE0 1202 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 GATA6Q92908 595 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 TRIM11Q96F44 468 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 LRIG1Q96JA1 1093 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 TMEM121BQ9BXQ6 578 aaPredicted RBP16.51■□□□□ 0.23
CLN8-206ENST00000523237 NOL6Q9H6R4 1146 aaKnown RBP16.51■□□□□ 0.23
CLN8-206ENST00000523237 DONSONQ9NYP3 566 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
CLN8-206ENST00000523237 AP4E1Q9UPM8 1137 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 SCINQ9Y6U3 715 aa16.51■□□□□ 0.23
CLN8-206ENST00000523237 KMT2BQ9UMN6 2715 aaPredicted RBP16.51■□□□□ 0.23
CLN8-206ENST00000523237 FRYQ5TBA9 3013 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 FAM221BA6H8Z2 402 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 TMEM8BA6NDV4 472 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 TMEM191CA6NGB0 347 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
CLN8-206ENST00000523237 GOLGA6L19H0YKK7 550 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 KRIT1O00522 736 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
CLN8-206ENST00000523237 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
CLN8-206ENST00000523237 SKILP12757 684 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 PRLRP16471 622 aa16.5■□□□□ 0.23
CLN8-206ENST00000523237 HNRNPA2B1P22626 353 aaKnown RBP16.5■□□□□ 0.23
CLN8-206ENST00000523237 AKT2P31751 481 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms