RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 PLPP6Q8IY26 295 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 MCOLN2Q8IZK6 566 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 CHST14Q8NCH0 376 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 GRIN3AQ8TCU5 1115 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 GATA6Q92908 595 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 ARHGEF2Q92974 986 aaKnown RBP11.11□□□□□ -0.63
PVT1-216ENST00000523068 TRIM44Q96DX7 344 aaPredicted RBP11.11□□□□□ -0.63
PVT1-216ENST00000523068 LRIG1Q96JA1 1093 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 EPAS1Q99814 870 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 HEPHQ9BQS7 1158 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 CNPY3Q9BT09 278 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 HDAC8Q9BY41 377 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 ERVMER34-1Q9H9K5 563 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 PARVAQ9NVD7 372 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 DONSONQ9NYP3 566 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 DNAI1Q9UI46 699 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 KLK13Q9UKR3 277 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 MAP1BP46821 2468 aaKnown RBP11.11□□□□□ -0.63
PVT1-216ENST00000523068 CABIN1Q9Y6J0 2220 aa11.11□□□□□ -0.63
PVT1-216ENST00000523068 KMT2BQ9UMN6 2715 aaPredicted RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 CHD8Q9HCK8 2581 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 PLXNB3Q9ULL4 1909 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 TCRBV5S1A1TA0A578 114 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 LRRC53A6NM62 1247 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 WNT9AO14904 365 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 CCP110O43303 1012 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 TNFSF14O43557 240 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ZNF821O75541 412 aaPredicted RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 SERPINC1P01008 464 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ITGAVP06756 1048 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ITGB7P26010 798 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 EPHB2P29323 1055 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 HTR7P34969 479 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ACVRL1P37023 503 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 CCNHP51946 323 aaPredicted RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 NEK3P51956 506 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 TAS2R38P59533 333 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 SNRPD1P62314 119 aaKnown RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 IL9RQ01113 521 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ASIC2Q16515 512 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 FBXL19Q6PCT2 694 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 SLCO6A1Q86UG4 719 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ZNF354CQ86Y25 554 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 PNPLA1Q8N8W4 532 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 KDF1Q8NAX2 398 aaPredicted RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 FAM174AQ8TBP5 190 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 BAP1Q92560 729 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
PVT1-216ENST00000523068 EDEM3Q9BZQ6 932 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 CATSPERBQ9H7T0 1116 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 NDFIP2Q9NV92 336 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 AIPL1Q9NZN9 384 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 FTSJ1Q9UET6 329 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 BTBD3Q9Y2F9 522 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
PVT1-216ENST00000523068 KNL1Q8NG31 2342 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 A0A1B0GTH6 734 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 A0A1W2PQU0 124 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 FGF10O15520 208 aaPredicted RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 KDELR3O43731 214 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 CREB3O43889 395 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 PCDH8O95206 1070 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 GSRP00390 522 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 GZMAP12544 262 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 ADRB3P13945 408 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 HNRNPA2B1P22626 353 aaKnown RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 EPHA8P29322 1005 aaPredicted RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 AKT2P31751 481 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 RXRGP48443 463 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 ZNF75DP51815 510 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 YBEYP58557 167 aaPredicted RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 RAD51Q06609 339 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 KIAA1161Q6NSJ0 714 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 TMC6Q7Z403 805 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 GALNT15Q8N3T1 639 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 RYBPQ8N488 228 aaPredicted RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 RTL3Q8N8U3 475 aaKnown RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 CASKIN2Q8WXE0 1202 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 RAB7BQ96AH8 199 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 KLHDC7BQ96G42 594 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 SYT11Q9BT88 431 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 OSBPL1AQ9BXW6 950 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 HAUS4Q9H6D7 363 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 ZDHHC6Q9H6R6 413 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 FZD10Q9ULW2 581 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 NEU3Q9UQ49 428 aa11.09□□□□□ -0.63
PVT1-216ENST00000523068 FCF1Q9Y324 198 aaKnown RBP11.09□□□□□ -0.63
PVT1-216ENST00000523068 FRYQ5TBA9 3013 aa11.08□□□□□ -0.64
PVT1-216ENST00000523068 GOLGA8CPA6NN73 597 aa11.08□□□□□ -0.64
PVT1-216ENST00000523068 WASH4PA8MWX3 477 aa11.08□□□□□ -0.64
PVT1-216ENST00000523068 EIF3CLB5ME19 914 aaKnown RBP11.08□□□□□ -0.64
PVT1-216ENST00000523068 SLC31A1O15431 190 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms