RNA–Protein interactions for RNA: ENST00000522133.1

IKBKB-222, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, human

TSL 5

Gene IKBKB, Length 576 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IKBKB-222	ENST00000522133	TRDMT1	O14717	391 aa	Known RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	SCAMP3	O14828	347 aa	Known RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	MTSS1	O43312	755 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	TSPAN3	O60637	253 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	RAMP2	O60895	175 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CLDN11	O75508	207 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	GCAT	O75600	419 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	PRAMEF12	O95522	483 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CCNC	P24863	283 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	OR1E1	P30953	314 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	BASP1	P80723	227 aa	Known RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ZNF33A	Q06730	810 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	RUNX3	Q13761	415 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CCDC6	Q16204	474 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	TMEM196	Q5HYL7	178 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ANKRD20A2	Q5SQ80	823 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	STPG1	Q5TH74	334 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ANKRD20A1	Q5TYW2	823 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ANKRD20A3	Q5VUR7	823 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	AFMID	Q63HM1	303 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	TIGD7	Q6NT04	549 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133		Q6ZNB5	142 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	HTR3D	Q70Z44	454 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CHST9	Q7L1S5	443 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	KBTBD6	Q86V97	674 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CIR1	Q86X95	450 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ZNF354C	Q86Y25	554 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	LRRC49	Q8IUZ0	686 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ARHGAP12	Q8IWW6	846 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	UMODL1-AS1	Q8N2C9	162 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	TAB3	Q8N5C8	712 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	HJURP	Q8NCD3	748 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CCDC110	Q8TBZ0	833 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	FBXO25	Q8TCJ0	367 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	SH3RF2	Q8TEC5	729 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CAVIN3	Q969G5	261 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	P2RY11	Q96G91	374 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	PRICKLE1	Q96MT3	831 aa	Predicted RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	GDAP1L1	Q96MZ0	367 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	SPATA13	Q96N96	652 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	VAT1	Q99536	393 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	SMG9	Q9H0W8	520 aa	Known RBP	10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	VPS45	Q9NRW7	570 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	ZDHHC18	Q9NUE0	388 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	NDFIP2	Q9NV92	336 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	PCDHGA5	Q9Y5G8	931 aa		10.15	□□□□□ -0.78
IKBKB-222	ENST00000522133	CHD5	Q8TDI0	1954 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133		A0A1B0GVM2	712 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	E2F8	A0AVK6	867 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	TCAF2	A6NFQ2	919 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	RASA4B	C9J798	803 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	SMAP	O00193	183 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	RASA4	O43374	803 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	GREM1	O60565	184 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	OPHN1	O60890	802 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	RHOBTB1	O94844	696 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	EPN2	O95208	641 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM153B	P0C7A2	387 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	DRD1	P21728	446 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	PTPN3	P26045	913 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	CHKA	P35790	457 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	PAPOLA	P51003	745 aa	Known RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	YBEY	P58557	167 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	RPS24	P62847	133 aa	Known RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	ZXDB	P98169	803 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	ZNF177	Q13360	481 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	MORF4L2	Q15014	288 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	POLD3	Q15054	466 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	PDGFRL	Q15198	375 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	ANO4	Q32M45	955 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	PARP15	Q460N3	678 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM153C	Q494X1	144 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FBXO43	Q4G163	708 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	C6orf118	Q5T5N4	469 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	BBS7	Q8IWZ6	715 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM217A	Q8IXS0	508 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	PPIL6	Q8IXY8	311 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	CPXM2	Q8N436	756 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	USP13	Q92995	863 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	TMA16	Q96EY4	203 aa	Known RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	MYEOV	Q96EZ4	313 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	TSGA13	Q96PP4	275 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM83C	Q9BQN1	747 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	EBF3	Q9H4W6	596 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	KIF9	Q9HAQ2	790 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	SP110	Q9HB58	689 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	TDP1	Q9NUW8	608 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	KLHL8	Q9P2G9	620 aa	Predicted RBP	10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	ZNF212	Q9UDV6	495 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM153A	Q9UHL3	310 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	SHOC2	Q9UQ13	582 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	SPAG17	Q6Q759	2223 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	USP24	Q9UPU5	2620 aa		10.14	□□□□□ -0.79
IKBKB-222	ENST00000522133	FAM208B	Q5VWN6	2430 aa		10.13	□□□□□ -0.79
IKBKB-222	ENST00000522133		E7EVH7	732 aa		10.13	□□□□□ -0.79
IKBKB-222	ENST00000522133	KCNK1	O00180	336 aa		10.13	□□□□□ -0.79
IKBKB-222	ENST00000522133	TM4SF5	O14894	197 aa		10.13	□□□□□ -0.79

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