RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 RAD54BQ9Y620 910 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 KRT33AO76009 404 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 STARP49675 285 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 PSEN2P49810 448 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 CDH17Q12864 832 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 NFYCQ13952 458 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 ACAP1Q15027 740 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 RASA2Q15283 850 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 CBWD6Q4V339 395 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 CBWD3Q5JTY5 395 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 CBWD5Q5RIA9 395 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 TAF2Q6P1X5 1199 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 TMC3Q7Z5M5 1100 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 ATG16L2Q8NAA4 619 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 MKL1Q969V6 931 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 RFT1Q96AA3 541 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 DNAJC11Q9NVH1 559 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 ZNF224Q9NZL3 707 aa12.26□□□□□ -0.45
ERGIC1-208ENST00000520399 SLIT3O75094 1523 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 GNG14A0A1W2PPG7 69 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SMCO3A2RU48 225 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CBX4O00257 560 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 UNC5CO95185 931 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PBLDP30039 288 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PPATQ06203 517 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PTAR1Q7Z6K3 402 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CHPFQ8IZ52 775 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 EDEM1Q92611 657 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ZNF285Q96NJ3 590 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 YME1L1Q96TA2 773 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 UQCC2Q9BRT2 126 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TRHDEQ9UKU6 1024 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TRPV2Q9Y5S1 764 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 B3GALNT1O75752 331 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 HLA-DQA2P01906 255 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 UMPSP11172 480 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 IL12AP29459 219 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SLC1A6P48664 564 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ARF3P61204 181 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ARF1P84077 181 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SPDYCQ5MJ68 293 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TRAPPC12Q8WVT3 735 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ROGDIQ9GZN7 287 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 C6orf62Q9GZU0 229 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 NINJ2Q9NZG7 142 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 MLXQ9UH92 298 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 DMGDHQ9UI17 866 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PLCL2Q9UPR0 1127 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TIMM13Q9Y5L4 95 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CYP3A7-CYP3A51PA0A087WV96 503 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 A0A0B4J269 797 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 NR5A2O00482 541 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CKMP06732 381 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CYP3A7P24462 503 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ACAT1P24752 427 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CHKAP35790 457 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 NME5P56597 212 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ABATP80404 500 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 NAB1Q13506 487 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TUBB3Q13509 450 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 EFR3AQ14156 821 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 AGMOQ6ZNB7 445 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 C1orf186Q6ZWK4 172 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 POC5Q8NA72 575 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SOCS4Q8WXH5 440 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 APOPT1Q96IL0 206 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 CELF6Q96J87 481 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 MNTQ99583 582 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 TBCDQ9BTW9 1192 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SEMA4AQ9H3S1 761 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 MIEF1Q9NQG6 463 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 COMMD8Q9NX08 183 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 UBP1Q9NZI7 540 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 EFCAB10A6NFE3 127 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ADM5C9JUS6 153 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 KPNA5O15131 536 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 RARAP10276 462 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 PSMB9P28065 219 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 ELK3P41970 407 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 SCARA3Q6AZY7 606 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 KCNMB4Q86W47 210 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 FAM20CQ8IXL6 584 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 LPCAT1Q8NF37 534 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 OR6Y1Q8NGX8 325 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 RBM22Q9NW64 420 aaKnown RBP eCLIP12.25□□□□□ -0.451e-6■■■■□ 26.2
ERGIC1-208ENST00000520399 NCKIPSDQ9NZQ3 722 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
ERGIC1-208ENST00000520399 M0QX08 132 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 LYNP07948 512 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 TPBGLP0DKB5 382 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 RAD23AP54725 363 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 ATP6AP1LQ52LC2 224 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 MSANTD1Q6ZTZ1 278 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 KATNAL2Q8IYT4 538 aa12.24□□□□□ -0.45
ERGIC1-208ENST00000520399 B3GALNT2Q8NCR0 500 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms