RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 L1CAMP32004 1257 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 NEK3P51956 506 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 BNIP3Q12983 259 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 SLFN11Q7Z7L1 901 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 TMPRSS12Q86WS5 348 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 ARHGEF2Q92974 986 aaKnown RBP25.81■■□□□ 1.72
VEGFA-220ENST00000519767 LRIG1Q96JA1 1093 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 SEPT11Q9NVA2 429 aaKnown RBP25.81■■□□□ 1.72
VEGFA-220ENST00000519767 HECAQ9UBI9 543 aaPredicted RBP25.81■■□□□ 1.72
VEGFA-220ENST00000519767 KNTC1P50748 2209 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 TMEM131Q92545 1883 aa25.81■■□□□ 1.72
VEGFA-220ENST00000519767 FAM72CH0Y354 149 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 TAF4O00268 1085 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 FERP16591 822 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 HNRNPA2B1P22626 353 aaKnown RBP25.8■■□□□ 1.72
VEGFA-220ENST00000519767 ACVRL1P37023 503 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 NCAPHQ15003 741 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 CCDC157Q569K6 752 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 FAM72AQ5TYM5 149 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 SFMBT2Q5VUG0 894 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 FAM72DQ6L9T8 149 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 FBXL19Q6PCT2 694 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 ZSCAN30Q86W11 494 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 FAM72BQ86X60 149 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 KLHL11Q9NVR0 708 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 DNAI1Q9UI46 699 aa25.8■■□□□ 1.72
VEGFA-220ENST00000519767 RAMP2O60895 175 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 GJB6O95452 261 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 CD160O95971 181 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 CCNHP51946 323 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 ZNF143P52747 638 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 RPS21P63220 83 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 POLD3Q15054 466 aaPredicted RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 KIAA1161Q6NSJ0 714 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 PPP1R2P3Q6NXS1 205 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 MON1BQ7L1V2 547 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 APTXQ7Z2E3 356 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 DCP2Q8IU60 420 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 CCDC185Q8N715 623 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 NDFIP2Q9NV92 336 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 DKK4Q9UBT3 224 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 FCF1Q9Y324 198 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 HS3ST3A1Q9Y663 406 aa25.79■■□□□ 1.72
VEGFA-220ENST00000519767 GOLGA4Q13439 2230 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 NYNRINQ9P2P1 1898 aaKnown RBP25.79■■□□□ 1.72
VEGFA-220ENST00000519767 DOCK4Q8N1I0 1966 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 ITPR1Q14643 2758 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 ZSCAN5CA6NGD5 496 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-220ENST00000519767 RNF103O00237 685 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 AP1G1O43747 822 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 THEGLP0DJG4 465 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 ADRB3P13945 408 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 PRLRP16471 622 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 DESP17661 470 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 AIF1P55008 147 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 ILKQ13418 452 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 TMEM259Q4ZIN3 620 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 DNAJC24Q6P3W2 148 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 DHRS13Q6UX07 377 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 KANSL1Q7Z3B3 1105 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 PDCD7Q8N8D1 485 aaKnown RBP25.78■■□□□ 1.72
VEGFA-220ENST00000519767 TSC1Q92574 1164 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 KLK6Q92876 244 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 RAB7BQ96AH8 199 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 HSD3B7Q9H2F3 369 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 MYO6Q9UM54 1294 aa25.78■■□□□ 1.72
VEGFA-220ENST00000519767 ZFHX4Q86UP3 3567 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 KDELR3O43731 214 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 RFPL3O75679 317 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 POP4O95707 220 aaKnown RBP25.77■■□□□ 1.72
VEGFA-220ENST00000519767 GSRP00390 522 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 SNRPD1P62314 119 aaKnown RBP25.77■■□□□ 1.72
VEGFA-220ENST00000519767 EFHC2Q5JST6 749 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 ACAD10Q6JQN1 1059 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 RYBPQ8N488 228 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-220ENST00000519767 VCPIP1Q96JH7 1222 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 CNPY3Q9BT09 278 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 SLC17A9Q9BYT1 436 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 MAGEB5Q9BZ81 275 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 ZFR2Q9UPR6 939 aaKnown RBP25.77■■□□□ 1.72
VEGFA-220ENST00000519767 CA5BQ9Y2D0 317 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 FADS3Q9Y5Q0 445 aa25.77■■□□□ 1.72
VEGFA-220ENST00000519767 ACACAQ13085 2346 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 TCRBV5S1A1TA0A578 114 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 TRABD2BA6NFA1 517 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 CKMT2P17540 419 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 YBEYP58557 167 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-220ENST00000519767 TYRO3Q06418 890 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 MYLK3Q32MK0 819 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 SCYL2Q6P3W7 929 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 CASKIN2Q8WXE0 1202 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 IFT43Q96FT9 208 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 OSBPL1AQ9BXW6 950 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 ZDHHC6Q9H6R6 413 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 DONSONQ9NYP3 566 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 NEU3Q9UQ49 428 aa25.76■■□□□ 1.71
VEGFA-220ENST00000519767 NBEAQ8NFP9 2946 aa25.75■■□□□ 1.71
VEGFA-220ENST00000519767 COL5A1P20908 1838 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-220ENST00000519767 TSPAN6O43657 245 aa25.75■■□□□ 1.71
VEGFA-220ENST00000519767 EPHB2P29323 1055 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms