RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 C11orf70Q9BRQ4 267 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 DYRK4Q9NR20 520 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 KLHL11Q9NVR0 708 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
CSMD1-205ENST00000519623 CXorf51AA0A1B0GTR3 108 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 TRIM38O00635 465 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 PCDH8O95206 1070 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 PLEKP08567 350 aaPredicted RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 THEGLP0DJG4 465 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 JUPP14923 745 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 RHOQP17081 205 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 CKMT2P17540 419 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 SDC4P31431 198 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 L1CAMP32004 1257 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 RFC1P35251 1148 aaPredicted RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 DNA2P51530 1060 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 HDAC4P56524 1084 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FGL2Q14314 439 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 PROX2Q3B8N5 592 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 ARL13BQ3SXY8 428 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FKBP15Q5T1M5 1219 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 SEL1L3Q68CR1 1132 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FBXL19Q6PCT2 694 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 TRIM72Q6ZMU5 477 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 STRADAQ7RTN6 431 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 ABI3BPQ7Z7G0 1075 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 OR13H1Q8NG92 308 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 ISG20Q96AZ6 181 aaKnown RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 BMFQ96LC9 184 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 MYOCQ99972 504 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FZD3Q9NPG1 666 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 LIMA1Q9UHB6 759 aaKnown RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 NEU3Q9UQ49 428 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FCF1Q9Y324 198 aaKnown RBP12.68□□□□□ -0.38
CSMD1-205ENST00000519623 DAAM1Q9Y4D1 1078 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 FADS3Q9Y5Q0 445 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 HS3ST3A1Q9Y663 406 aa12.68□□□□□ -0.38
CSMD1-205ENST00000519623 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 SDC3O75056 442 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 LRIG2O94898 1065 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 GIMD1P0DJR0 217 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 KRT3P12035 628 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 ADRB3P13945 408 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 HNRNPA2B1P22626 353 aaKnown RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 DGKAP23743 735 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 ITGB7P26010 798 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 AKT2P31751 481 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 MAPKAPK2P49137 400 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 NEK3P51956 506 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 GSCP56915 257 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 CLDN2P57739 230 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 ZNF211Q13398 564 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 ILKQ13418 452 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 SYCP1Q15431 976 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 CLEC16AQ2KHT3 1053 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 WDR59Q6PJI9 974 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 PHF13Q86YI8 300 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 SLC22A18ASQ8N1D0 253 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 CCDC185Q8N715 623 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 HNRNPLLQ8WVV9 542 aaKnown RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 PPP1R16AQ96I34 528 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 FEM1CQ96JP0 617 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 SLC17A9Q9BYT1 436 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 ADAM22Q9P0K1 906 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 HECAQ9UBI9 543 aaPredicted RBP12.67□□□□□ -0.38
CSMD1-205ENST00000519623 DNAI1Q9UI46 699 aa12.67□□□□□ -0.38
CSMD1-205ENST00000519623 IGSF10Q6WRI0 2623 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 TCRBV5S1A1TA0A578 114 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 POM121BA6NF01 834 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 SIGLEC16A6NMB1 481 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 RAD51BO15315 384 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 AP1G1O43747 822 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 PAK4O96013 591 aaPredicted RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 TPM2P07951 284 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 ACP1P24666 158 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 GKP32189 559 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 ETFBP38117 255 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 NSFP46459 744 aaKnown RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 RPS21P63220 83 aaKnown RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 TARDBPQ13148 414 aaKnown RBP eCLIP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 COL28A1Q2UY09 1125 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 Q6ZSR6 202 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 PARS2Q7L3T8 475 aaKnown RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 APTXQ7Z2E3 356 aaKnown RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 CACTIN-AS1Q8N1I8 211 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 FAM174AQ8TBP5 190 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 FAM172AQ8WUF8 416 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms