RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 SLC10A7Q0GE19 358 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 DHX34Q14147 1143 aaKnown RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 STARD3Q14849 445 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 DLG2Q15700 870 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 PTPRNQ16849 979 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 P3H1Q32P28 736 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 TEX44Q53QW1 395 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 RALGPS1Q5JS13 557 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 SYDE1Q6ZW31 735 aaPredicted RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 SFTPA1Q8IWL2 248 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 KLHL7Q8IXQ5 586 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 ALLCQ8N6M5 410 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 CCHCR1Q8TD31 782 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 USP33Q8TEY7 942 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 RTP4Q96DX8 246 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 MRGPRX3Q96LB0 322 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 SPATA13Q96N96 652 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 IL12RB2Q99665 862 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 DDX47Q9H0S4 455 aaKnown RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 L2HGDHQ9H9P8 463 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 NT5MQ9NPB1 228 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 RBM22Q9NW64 420 aaKnown RBP eCLIP14.37□□□□□ -0.11
SDC2-203ENST00000519587 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 FCF1Q9Y324 198 aaKnown RBP14.37□□□□□ -0.11
SDC2-203ENST00000519587 CKAP5Q14008 2032 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 USP34Q70CQ2 3546 aa14.37□□□□□ -0.11
SDC2-203ENST00000519587 C5orf60A6NFR6 353 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 SHISA7A6NL88 538 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
SDC2-203ENST00000519587 ATG13O75143 517 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 RNF40O75150 1001 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 KLF8O95600 359 aaPredicted RBP14.36□□□□□ -0.11
SDC2-203ENST00000519587 MT-CO1P00395 513 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 CES1P23141 567 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
SDC2-203ENST00000519587 MAGEA9P43362 315 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 AP1S1P61966 158 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 DR1Q01658 176 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 RAD51Q06609 339 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 ITKQ08881 620 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 C2orf54Q08AI8 447 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 WASHC5Q12768 1159 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 ZBTB17Q13105 803 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PPP1R7Q15435 360 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 HNRNPA1L2Q32P51 320 aaKnown RBP14.36□□□□□ -0.11
SDC2-203ENST00000519587 C2orf27AQ580R0 203 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 EOGTQ5NDL2 527 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 CCDC70Q6NSX1 233 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 TTC27Q6P3X3 843 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 B4GALNT4Q76KP1 1039 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 MAATS1Q7Z4T9 603 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 DSG4Q86SJ6 1040 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PLPP6Q8IY26 295 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PRSS33Q8NF86 280 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PJA1Q8NG27 643 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 OR2AP1Q8NGE2 309 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 LRRN4Q8WUT4 740 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 EZH1Q92800 747 aaPredicted RBP14.36□□□□□ -0.11
SDC2-203ENST00000519587 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 LRRC45Q96CN5 670 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 AGAP3Q96P47 875 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 KRT12Q99456 494 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 MGME1Q9BQP7 344 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 IER2Q9BTL4 223 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 TMEM245Q9H330 911 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 FBRSQ9HAH7 460 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 USP29Q9HBJ7 922 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PCDH9Q9HC56 1237 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 CACNA2D2Q9NY47 1150 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 PAK5Q9P286 719 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 SUN2Q9UH99 717 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 RSPH14Q9UHP6 348 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 SLCO3A1Q9UIG8 710 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 STON1Q9Y6Q2 735 aa14.36□□□□□ -0.11
SDC2-203ENST00000519587 TARSL2A2RTX5 802 aaKnown RBP14.35□□□□□ -0.11
SDC2-203ENST00000519587 GOLGA6CA6NDK9 693 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 GOLGA6BA6NDN3 693 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 FAM170BA6NMN3 283 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 TTC34A8MYJ7 566 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 K7ERQ8 282 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 GCATO75600 419 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 CD160O95971 181 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 HLA-DQB2P05538 268 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 EPHX1P07099 455 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 GOLGA6DP0CG33 693 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 CHRNB1P11230 501 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 CA4P22748 312 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 KCNJ1P48048 391 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 PTPN5P54829 565 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 NSUN2Q08J23 767 aaKnown RBP eCLIP14.35□□□□□ -0.11
SDC2-203ENST00000519587 ENPP2Q13822 863 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 PRPSAP1Q14558 356 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 GRM3Q14832 879 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 CYTH1Q15438 398 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 ANKRD20A2Q5SQ80 823 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 ANKRD20A1Q5TYW2 823 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 ANKRD20A3Q5VUR7 823 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 TRIM67Q6ZTA4 783 aa14.35□□□□□ -0.11
SDC2-203ENST00000519587 Q6ZVU0 165 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms