RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 ALDH16A1Q8IZ83 802 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PACRGLQ8N7B6 248 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SHCBP1Q8NEM2 672 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SIGLEC10Q96LC7 697 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FICDQ9BVA6 458 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DDX28Q9NUL7 540 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DDIT4Q9NX09 232 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 KIF17Q9P2E2 1029 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FADS3Q9Y5Q0 445 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 H0YJX3 145 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 GOLGA8TH3BQL2 631 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PMPCBO75439 489 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NCAM1P13591 858 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TAF6P49848 677 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SLC5A3P53794 718 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 MRPS15P82914 257 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 TOP3AQ13472 1001 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 DGUOKQ16854 277 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FSTL4Q6MZW2 842 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 B3GNT9Q6UX72 402 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CYS1Q717R9 158 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CAND1Q86VP6 1230 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 MPP5Q8N3R9 675 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SMYD1Q8NB12 490 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZFP28Q8NHY6 868 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PNPT1Q8TCS8 783 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 MAGEE2Q8TD90 523 aaPredicted RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 S100ZQ8WXG8 99 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 FAM162AQ96A26 154 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PHF21BQ96EK2 531 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 BIRC8Q96P09 236 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 NIFKQ9BYG3 293 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 RHOBTB2Q9BYZ6 727 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CDT1Q9H211 546 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 WDCPQ9H6R7 721 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 SP110Q9HB58 689 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 CDHR5Q9HBB8 845 aa6.75□□□□□ -1.33
CPNE3-203ENST00000517490 PTBP2Q9UKA9 531 aaKnown RBP6.75□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF536O15090 1300 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF541Q9H0D2 1346 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 UBA6A0AVT1 1052 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 KCNU1A8MYU2 1149 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 MT-CO1P00395 513 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 PTPN9P43378 593 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CLK1P49759 484 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 POU6F1Q14863 301 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 OTUD3Q5T2D3 398 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TTC23Q5W5X9 447 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF470Q6ECI4 717 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 VPS37AQ8NEZ2 397 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 FNDC8Q8TC99 324 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 HSPBAP1Q96EW2 488 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 GJD4Q96KN9 370 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 HSFY1Q96LI6 401 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 OR52B2Q96RD2 323 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SEPHS2Q99611 448 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 C17orf80Q9BSJ5 609 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 MTG1Q9BT17 334 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ASPSCR1Q9BZE9 553 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 UNKQ9C0B0 810 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 COMMD8Q9NX08 183 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CNTN3Q9P232 1028 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 IGSF9Q9P2J2 1179 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SUCOQ9UBS9 1254 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CNOT11Q9UKZ1 510 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 DPYSL4O14531 572 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 LTA4HP09960 611 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TKTP29401 623 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 RAD23AP54725 363 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CLDN10P78369 228 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SKIV2LQ15477 1246 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 C6orf10Q5SRN2 563 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 IL23RQ5VWK5 629 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 EGFLAMQ63HQ2 1017 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 STRADAQ7RTN6 431 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ADGRF2Q8IZF7 708 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 C8orf59Q8N0T1 100 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 LEMD2Q8NC56 503 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 RSPH1Q8WYR4 309 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 PPP1R10Q96QC0 940 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SMAD5Q99717 465 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TBL1YQ9BQ87 522 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TRMOQ9BU70 441 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 MYOZ2Q9NPC6 264 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 OXSMQ9NWU1 459 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 UBP1Q9NZI7 540 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 A0A0J9YVX5 310 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CNOT3O75175 753 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SOAT2O75908 522 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 BAIAP3O94812 1187 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ZBTB11O95625 1053 aaPredicted RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 GSNP06396 782 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF252P-AS1Q0IIN9 211 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 RALGDSQ12967 914 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SPIDRQ14159 915 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 INAQ16352 499 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 PCSK7Q16549 785 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 SLC9A4Q6AI14 798 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 REP15Q6BDI9 236 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TIGD7Q6NT04 549 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms