RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 SYTL2Q9HCH5 934 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 LZTS1Q9Y250 596 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 LTBP3Q9NS15 1303 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 HNRNPCL2B2RXH8 293 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 DDHD2O94830 711 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ME2P23368 584 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 ENPEPQ07075 957 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PPIDQ08752 370 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 BTG3Q14201 252 aaPredicted RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PACS1Q6VY07 963 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 GPR142Q7Z601 462 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 NIPA2Q8N8Q9 360 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 OR9Q1Q8NGQ5 310 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 FNIP1Q8TF40 1166 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 DGCR14Q96DF8 476 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 NXF3Q9H4D5 531 aaKnown RBP10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 GOLGA2P5Q9HBQ8 144 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 BTBD7Q9P203 1132 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PCDHGC3Q9UN70 934 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 AP4B1Q9Y6B7 739 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 PTPRJQ12913 1337 aa10.98□□□□□ -0.65
PCDHGA1-202ENST00000517417 KATNA1O75449 491 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ITGA2BP08514 1039 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 HSPA1AP0DMV8 641 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 HSPA1BP0DMV9 641 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 GOT1P17174 413 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 HLA-DPA1P20036 260 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 MSX2P35548 267 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 GRTP1Q5TC63 336 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 LPCAT2Q7L5N7 544 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 UNC93AQ86WB7 457 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 MYO1HQ8N1T3 1032 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 PQLC1Q8N2U9 271 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACMSDQ8TDX5 336 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 SEMA6AQ9H2E6 1030 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 TLE6Q9H808 572 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 TBC1D13Q9NVG8 400 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 MARCH2Q9P0N8 246 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 DDX60LQ5H9U9 1706 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 UBDO15205 165 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 PPP1R26Q5T8A7 1209 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACBD5Q5T8D3 534 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 SDHAF4Q5VUM1 108 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLD5Q8N7P1 536 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACOX2Q99424 681 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 TMEM79Q9BSE2 394 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 SDCBP2Q9H190 292 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 LHX5Q9H2C1 402 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ACTR8Q9H981 624 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 RGS18Q9NS28 235 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 TRHDEQ9UKU6 1024 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 KLF11O14901 512 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 NAGLUP54802 743 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ADARP55265 1226 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 NFYCQ13952 458 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 NR6A1Q15406 480 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 NRF1Q16656 503 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ARMC3Q5W041 872 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 RETSATQ6NUM9 610 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 C16orf59Q7L2K0 433 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 CACUL1Q86Y37 369 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 EGFL6Q8IUX8 553 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF786Q8N393 782 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 DIS3LQ8TF46 1054 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 SOCS4Q8WXH5 440 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ERLEC1Q96DZ1 483 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 MARK4Q96L34 752 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 CPNE1Q99829 537 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 C6orf203Q9P0P8 240 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 PEX1O43933 1283 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF23P17027 643 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 CMC1Q7Z7K0 106 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 MRPS26Q9BYN8 205 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 TRIM45Q9H8W5 580 aaPredicted RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 PCDH18Q9HCL0 1135 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 DNAJB4Q9UDY4 337 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC25A13Q9UJS0 675 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM50BQ9Y247 325 aa10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 EIF3LQ9Y262 564 aaKnown RBP10.97□□□□□ -0.65
PCDHGA1-202ENST00000517417 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 CCNFP41002 786 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC25A11Q02978 314 aaKnown RBP10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 TTC33Q6PID6 262 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 TSHZ1Q6ZSZ6 1077 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 ANKRD52Q8NB46 1076 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 C18orf25Q96B23 403 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 HSFY1Q96LI6 401 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 RNF208Q9H0X6 261 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 WDR41Q9HAD4 459 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 TBC1D23Q9NUY8 699 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 PSMD13Q9UNM6 376 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 POMPQ9Y244 141 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 TEX264Q9Y6I9 313 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.65
PCDHGA1-202ENST00000517417 PRIM2P49643 509 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms