RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 OLIG2Q13516 323 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PSMD6Q15008 389 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 MED22Q15528 200 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ASTE1Q2TB18 679 aaPredicted RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PCGF3Q3KNV8 242 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 C10orf76Q5T2E6 689 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 FAM171A1Q5VUB5 890 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ISM2Q6H9L7 571 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 TTI2Q6NXR4 508 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 KLHL35Q6PF15 583 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 RBM44Q6ZP01 1051 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 UEVLDQ8IX04 471 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 GHDCQ8N2G8 530 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 CCDC191Q8NCU4 936 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 OR4N2Q8NGD1 307 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 BCAS4Q8TDM0 211 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 FAR1Q8WVX9 515 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 NEU4Q8WWR8 484 aaPredicted RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PSPC1Q8WXF1 523 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 SMARCE1Q969G3 411 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 C1orf74Q96LT6 269 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ADAD1Q96M93 576 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 FCRL5Q96RD9 977 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 MACROD1Q9BQ69 325 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 MXD3Q9BW11 206 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 MAK16Q9BXY0 300 aaKnown RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 EDEM3Q9BZQ6 932 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 TOR3AQ9H497 397 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PLEKHA4Q9H4M7 779 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 KAT14Q9H8E8 782 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PCDHB16Q9NRJ7 776 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 SNTG1Q9NSN8 517 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 RPS6KA6Q9UK32 745 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF215Q9UL58 517 aaPredicted RBP3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 PCDHGB4Q9UN71 923 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 MTMR6Q9Y217 621 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 RUSC2Q8N2Y8 1516 aa3.53□□□□□ -1.84
RNU6-840P-201ENST00000517275 ZNF335Q9H4Z2 1342 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 FAM237BA0A1B0GVD1 139 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 FAM90A8PA6NJQ4 464 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 LRRC53A6NM62 1247 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 LIASO43766 372 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 BEST1O76090 585 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 FAM90A13PP0C7W8 464 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 FAM90A24PP0C7X0 464 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 PRR35P0CG20 571 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 GABRB1P18505 474 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 TFEBP19484 476 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 MAKP20794 623 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 RYKP34925 604 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 PPARGP37231 505 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SKIV2L2P42285 1042 aaKnown RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 PTPN9P43378 593 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 CPA2P48052 419 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 RARRES1P49788 294 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ARSFP54793 590 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 CDH8P55286 799 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 HDAC4P56524 1084 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SNX16P57768 344 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SIM1P81133 766 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SLC18A2Q05940 514 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 PKP1Q13835 747 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 KPNB1Q14974 876 aaKnown RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 RASA2Q15283 850 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 TAF11Q15544 211 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 HIST2H2ACQ16777 129 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ME3Q16798 604 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 KRT24Q2M2I5 525 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ALG11Q2TAA5 492 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 FBXO43Q4G163 708 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 GARNL3Q5VVW2 1013 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 GPR139Q6DWJ6 353 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 NAPRTQ6XQN6 538 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 CHST9Q7L1S5 443 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 WDR5BQ86VZ2 330 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 HACE1Q8IYU2 909 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 TAGAPQ8N103 731 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SARAFQ96BY9 339 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 MMABQ96EY8 250 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ZNF764Q96H86 408 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 CMTM3Q96MX0 182 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 UROC1Q96N76 676 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ZMAT2Q96NC0 199 aaKnown RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 IFT27Q9BW83 186 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 IKZF4Q9H2S9 585 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 PDZD7Q9H5P4 517 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SH2D4AQ9H788 454 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 GIMAP4Q9NUV9 329 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ARL8BQ9NVJ2 186 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 WSB2Q9NYS7 404 aaPredicted RBP3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 MKLN1Q9UL63 735 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 DHDHQ9UQ10 334 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 TNFSF13BQ9Y275 285 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 SESN1Q9Y6P5 492 aa3.52□□□□□ -1.85
RNU6-840P-201ENST00000517275 ADGRF5Q8IZF2 1346 aa3.51□□□□□ -1.85
RNU6-840P-201ENST00000517275 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.51□□□□□ -1.85
RNU6-840P-201ENST00000517275 ADAM20O43506 726 aa3.51□□□□□ -1.85
RNU6-840P-201ENST00000517275 EXOC3O60645 756 aa3.51□□□□□ -1.85
RNU6-840P-201ENST00000517275 ENTPD3O75355 529 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms