RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TSC22D4Q9Y3Q8 395 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CYP1A1P04798 512 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 NPR3P17342 541 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 FASP25445 335 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 HOXC12P31275 282 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 VHLP40337 213 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CCZ1BP86790 482 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CCZ1P86791 482 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 OASLQ15646 514 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CYP2R1Q6VVX0 501 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 PHYKPLQ8IUZ5 450 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 SNRNP27Q8WVK2 155 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 STARD8Q92502 1023 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RELTQ969Z4 430 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ZYG11BQ9C0D3 744 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 VIPAS39Q9H9C1 493 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 ZFP14Q9HCL3 533 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 STARD13Q9Y3M8 1113 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 A0A087X1B8 175 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 SLITRK3O94933 977 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 KCNH1O95259 989 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 TOP3BO95985 862 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 PSMB4P28070 264 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 MIPP30301 263 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 MAXP61244 160 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CRADDP78560 199 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 MCL1Q07820 350 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CCNG2Q16589 344 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 REXO1L1PQ8IX06 675 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 RNF148Q8N7C7 305 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 NOA1Q8NC60 698 aaKnown RBP11.14□□□□□ -0.63
TRIM41-209ENST00000515834 PMEPA1Q969W9 287 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 VAV3Q9UKW4 847 aa11.14□□□□□ -0.63
TRIM41-209ENST00000515834 CCND1P24385 295 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 TMED10P49755 219 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 CBX2Q14781 532 aaPredicted RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 HYIQ5T013 277 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PPP2R2DQ66LE6 453 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 CATSPERGQ6ZRH7 1159 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PTPRJQ12913 1337 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PTGES3LE9PB15 166 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SF1Q15637 639 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 TAF8Q7Z7C8 310 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 DNAJC5Q9H3Z4 198 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SLC35C2Q9NQQ7 365 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ANKRD6Q9Y2G4 727 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 AP4S1Q9Y587 144 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 TRPM1Q7Z4N2 1603 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SPHKAPQ2M3C7 1700 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ANKRD63C9JTQ0 380 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 FFAR2O15552 330 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 FCGR1AP12314 374 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 GZMAP12544 262 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ERVK-21P61565 698 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 STXBP1P61764 594 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 FOXM1Q08050 763 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 MPPE1Q53F39 396 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PPP1R26Q5T8A7 1209 aaPredicted RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 FAM151BQ6UXP7 276 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ACTRT2Q8TDY3 377 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PMM1Q92871 262 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ZBTB10Q96DT7 871 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 MARK4Q96L34 752 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 NDNQ99608 321 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PABPC3Q9H361 631 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 EPS8L2Q9H6S3 715 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 DDX4Q9NQI0 724 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ATAD3AQ9NVI7 634 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 CHKBQ9Y259 395 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 TRUB2O95900 331 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 IL6P05231 212 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 H2AFXP16104 143 aaPredicted RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 DUSP4Q13115 394 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ITGADQ13349 1161 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 KLHL35Q6PF15 583 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 OTOP1Q7RTM1 612 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PAGE2Q7Z2X7 111 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 STK32CQ86UX6 486 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SLC5A5Q92911 643 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SLC4A9Q96Q91 983 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ZDHHC9Q9Y397 364 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 USP31Q70CQ4 1352 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ENO4A6NNW6 628 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 MATN4O95460 622 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ECDO95905 644 aaPredicted RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 ETS1P14921 441 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 RBL1P28749 1068 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 NOS2P35228 1153 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 HK2P52789 917 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 CBFBQ13951 182 aa11.13□□□□□ -0.63
TRIM41-209ENST00000515834 SUZ12Q15022 739 aaKnown RBP11.13□□□□□ -0.63
TRIM41-209ENST00000515834 PMF1Q6P1K2 205 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms