RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 FAM53CQ9NYF3 392 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 FZD4Q9ULV1 537 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 NCKAP1Q9Y2A7 1128 aa10.11□□□□□ -0.79
CCL28-203ENST00000513525 ARID1BQ8NFD5 2236 aaPredicted RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 MYLKQ15746 1914 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 FAM181BA6NEQ2 426 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 TTC34A8MYJ7 566 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 M0QYT0 321 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 MTA2O94776 668 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 TRIM16O95361 564 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 FTCDO95954 541 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 CD27P26842 260 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 NNMTP40261 264 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SIM1P81133 766 aaPredicted RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 CDR2Q01850 454 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 AUHQ13825 339 aaKnown RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 CST6Q15828 149 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 GLE1Q53GS7 698 aaKnown RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 BRMS1LQ5PSV4 323 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 RNF219Q5W0B1 726 aaPredicted RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 NAXDQ8IW45 347 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SLC20A1Q8WUM9 679 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 RNF34Q969K3 372 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 ALG14Q96F25 216 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 RPRD1AQ96P16 312 aaPredicted RBP10.1□□□□□ -0.79
CCL28-203ENST00000513525 FAM129BQ96TA1 746 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 ORAI3Q9BRQ5 295 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SELENOOQ9BVL4 669 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 GAREM1Q9H706 876 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 FBXL12Q9NXK8 326 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 ARHGEF38Q9NXL2 777 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SLCO3A1Q9UIG8 710 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 STAP1Q9ULZ2 295 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 HS3ST4Q9Y661 456 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 ANKRD36A6QL64 1941 aa10.1□□□□□ -0.79
CCL28-203ENST00000513525 SYNJ2BP-COX16A0A087WUM0 186 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SPAARA0A1B0GVQ0 90 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 MID1O15344 667 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SH3BP5O60239 455 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PAGE1O75459 146 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 CLDN11O75508 207 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 LSM8O95777 96 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 IGHV4-34P06331 123 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PROS1P07225 676 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 RHOXF2BP0C7M4 288 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PDGFRAP16234 1089 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 CHRNB2P17787 502 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 MZF1P28698 734 aaPredicted RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 CXCR3P49682 368 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 STK19P49842 368 aaPredicted RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 FAM193AP78312 1265 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 NME3Q13232 169 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 ELAVL3Q14576 367 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 TEAD4Q15561 434 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 ZNF423Q2M1K9 1284 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 MAP9Q49MG5 647 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 ACBD5Q5T8D3 534 aaPredicted RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 KIAA0895LQ68EN5 471 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 C11orf63Q6NUN7 778 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PPP1R2P3Q6NXS1 205 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 UNQ6494/PRO21346Q6UXR6 183 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 DBX2Q6ZNG2 339 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 ARCQ7LC44 396 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PEX26Q7Z412 305 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 GLRX5Q86SX6 157 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 NOP9Q86U38 636 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 CIR1Q86X95 450 aaPredicted RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 XYLT1Q86Y38 959 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 MMAAQ8IVH4 418 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 SLC35G2Q8TBE7 412 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SNX19Q92543 992 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 IGSF8Q969P0 613 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 FAM131CQ96AQ9 280 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 C18orf8Q96DM3 657 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 RPL10LQ96L21 214 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 RHOXF2Q9BQY4 288 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SCNM1Q9BWG6 230 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 TM9SF3Q9HD45 589 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 TM7SF3Q9NS93 570 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PIGVQ9NUD9 493 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCL28-203ENST00000513525 COX16Q9P0S2 106 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SERGEFQ9UGK8 458 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 VANGL2Q9ULK5 521 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 TPX2Q9ULW0 747 aaKnown RBP10.09□□□□□ -0.79
CCL28-203ENST00000513525 TBC1D30Q9Y2I9 924 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 NEUROG3Q9Y4Z2 214 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 PCDHGB2Q9Y5G2 931 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 SLCO1B1Q9Y6L6 691 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 CFAP47Q6ZTR5 3102 aa10.09□□□□□ -0.79
CCL28-203ENST00000513525 GOLGA4Q13439 2230 aaKnown RBP10.08□□□□□ -0.8
CCL28-203ENST00000513525 A0A1B0GVT2 93 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 A0A1W2PP55 124 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 FAM221BA6H8Z2 402 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 LRRC72A6NJI9 287 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 ATP9BO43861 1147 aa10.08□□□□□ -0.8
CCL28-203ENST00000513525 CBFA2T3O75081 653 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms