RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RABIFP47224 123 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ATP1A2P50993 1020 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 NDUFA8P51970 172 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 TCEA2Q15560 299 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 DLG2Q15700 870 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 E2F4Q16254 413 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 DEFB109BQ30KR1 87 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ZACNQ401N2 412 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 C1orf220Q5T0J3 134 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ESRP1Q6NXG1 681 aaKnown RBP9.34□□□□□ -0.91
NUP54-211ENST00000512151 NYAP1Q6ZVC0 841 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 CIR1Q86X95 450 aaPredicted RBP9.34□□□□□ -0.91
NUP54-211ENST00000512151 SLITRK4Q8IW52 837 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 FAM114A1Q8IWE2 563 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 PHACTR4Q8IZ21 702 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 PDILTQ8N807 584 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 ARL10Q8N8L6 244 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 PCDH19Q8TAB3 1148 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 TATDN2Q93075 761 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 AZIN2Q96A70 460 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 CATSPER2Q96P56 530 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 SLC17A9Q9BYT1 436 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 SEMA6CQ9H3T2 930 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 CASS4Q9NQ75 786 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 IPO11Q9UI26 975 aaKnown RBP9.34□□□□□ -0.91
NUP54-211ENST00000512151 PDZD2O15018 2839 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 MED13LQ71F56 2210 aa9.34□□□□□ -0.91
NUP54-211ENST00000512151 KPNA3O00505 521 aaPredicted RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 ALOX15BO15296 676 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 EIF3DO15371 548 aaKnown RBP eCLIP9.33□□□□□ -0.92
NUP54-211ENST00000512151 POLR2DO15514 142 aaKnown RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 DDAH2O95865 285 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 RPN1P04843 607 aaKnown RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 ZNF18P17022 549 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 UGT1A3P35503 534 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 TBX4P57082 545 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 PFN3P60673 137 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 ADIGQ0VDE8 80 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 CDC20Q12834 499 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 ACCSLQ4AC99 568 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 SV2AQ7L0J3 742 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 ZC3H18Q86VM9 953 aaKnown RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 HEATR4Q86WZ0 1026 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 CCNJLQ8IV13 435 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 SFTPA2Q8IWL1 248 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 UNC45BQ8IWX7 931 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 CCDC65Q8IXS2 484 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 LGI2Q8N0V4 545 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 FMR1NBQ8N0W7 255 aaPredicted RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 SLC4A11Q8NBS3 891 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 CHST14Q8NCH0 376 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 OR52K2Q8NGK3 314 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 FAM174AQ8TBP5 190 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 GPT2Q8TD30 523 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 TAF4BQ92750 862 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 ALG14Q96F25 216 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 HEXIM2Q96MH2 286 aaKnown RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 RNF215Q9Y6U7 377 aa9.33□□□□□ -0.92
NUP54-211ENST00000512151 ZNF106Q9H2Y7 1883 aaKnown RBP9.33□□□□□ -0.92
NUP54-211ENST00000512151 CELSR1Q9NYQ6 3014 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 EXOC3O60645 756 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CNTN5O94779 1100 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 LDLRP01130 860 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 PDGFAP04085 211 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 NNMTP40261 264 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 AP3M2P53677 418 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 UBE2HP62256 183 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 MRPL49Q13405 166 aaKnown RBP9.32□□□□□ -0.92
NUP54-211ENST00000512151 ARHGAP44Q17R89 818 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 EIF2S3LQ2VIR3 472 aaKnown RBP9.32□□□□□ -0.92
NUP54-211ENST00000512151 EFHC2Q5JST6 749 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 PHF19Q5T6S3 580 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 ARHGAP17Q68EM7 881 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 STXBP4Q6ZWJ1 553 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CACNA2D3Q8IZS8 1091 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 IL22RA1Q8N6P7 574 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 ANKRD52Q8NB46 1076 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CPT1CQ8TCG5 803 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 PDCD6IPQ8WUM4 868 aaKnown RBP9.32□□□□□ -0.92
NUP54-211ENST00000512151 APOBEC4Q8WW27 367 aaKnown RBP9.32□□□□□ -0.92
NUP54-211ENST00000512151 ERCC4Q92889 916 aaPredicted RBP9.32□□□□□ -0.92
NUP54-211ENST00000512151 TMEM159Q96B96 161 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 DHX58Q96C10 678 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 SLC45A3Q96JT2 553 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CMKLR1Q99788 373 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 B3GNT4Q9C0J1 378 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CDH19Q9H159 772 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CYP3A43Q9HB55 503 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 PRDM8Q9NQV8 689 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 ABCC13Q9NSE7 274 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 FAM13BQ9NYF5 915 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 CCDC39Q9UFE4 941 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 AKAP9Q99996 3911 aa9.32□□□□□ -0.92
NUP54-211ENST00000512151 TYW5A2RUC4 315 aaKnown RBP9.31□□□□□ -0.92
NUP54-211ENST00000512151 GOLGA6L4A6NEF3 574 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms