RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 KPNA7A9QM74 516 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TARM1B6A8C7 271 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 KLRF2D3W0D1 207 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 K7ERQ8 282 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MED7O43513 233 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PABPC4LP0CB38 370 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 LAMP2P13473 410 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ALADP13716 330 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 JUNDP17535 347 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PSMA5P28066 241 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 HOXA7P31268 230 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MCM7P33993 719 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CAPZA2P47755 286 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CLCNKAP51800 687 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ERVK-9P63128 1117 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ERVK-24P63145 666 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 OCRLQ01968 901 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYP27A1Q02318 531 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SCRN1Q12765 414 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPM6BQ13491 265 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 STIM1Q13586 685 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAPSNQ13702 412 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ARHGAP19Q14CB8 494 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 HERC3Q15034 1050 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 PDCD1Q15116 288 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RPS6KA2Q15349 733 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SF1Q15637 639 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TYSND1Q2T9J0 566 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ARHGAP15Q53QZ3 475 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 GRTP1Q5TC63 336 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CACHD1Q5VU97 1274 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMEM270Q6UE05 265 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 HDXQ7Z353 690 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 KIF18BQ86Y91 864 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM217AQ8IXS0 508 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MAIP1Q8WWC4 291 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 FBXO32Q969P5 355 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 USP28Q96RU2 1077 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 USB1Q9BQ65 265 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 C9orf16Q9BUW7 83 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 UCK1Q9HA47 277 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 KIF9Q9HAQ2 790 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 KCNK13Q9HB14 408 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SEPSECSQ9HD40 501 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 AGPAT5Q9NUQ2 364 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 WWOXQ9NZC7 414 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 IGSF9Q9P2J2 1179 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 MORF4L1Q9UBU8 362 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 AFF4Q9UHB7 1163 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ATP6V1HQ9UI12 483 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ITGA11Q9UKX5 1188 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 INTS6Q9UL03 887 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMPRSS11EQ9UL52 423 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CORO1CQ9ULV4 474 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 SMG5Q9UPR3 1016 aaKnown RBP5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHKBQ9Y259 395 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCL27Q9Y4X3 112 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 RIPK3Q9Y572 518 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZSWIM8A7E2V4 1837 aa5.13□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC151A5D8V7 595 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR5K4A6NMS3 321 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 EML1O00423 815 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PODXLO00592 558 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 HAT1O14929 419 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ASNA1O43681 348 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PLEKHA8P1O95397 391 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CST3P01034 146 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ALPPP05187 535 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CKMP06732 381 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 EPHX1P07099 455 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PGK2P07205 417 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 FHP07954 510 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCNYL3P0C7X3 344 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ALPPL2P10696 532 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TBXAS1P24557 533 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADD1P35611 737 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ETV5P41161 510 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PTGIRP43119 386 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 LMAN1P49257 510 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 IRAK1P51617 712 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ALDH18A1P54886 795 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 YPEL5P62699 121 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 UBE2IP63279 158 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NKX3-2P78367 333 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TROAPQ12815 778 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 XRCC4Q13426 336 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 INSCQ1MX18 579 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MYLK3Q32MK0 819 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PCGF3Q3KNV8 242 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF628Q5EBL2 1059 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PPP1R26Q5T8A7 1209 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NDUFAF5Q5TEU4 345 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PEAR1Q5VY43 1037 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DMRTA1Q5VZB9 504 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 OVOS1Q6IE37 1185 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ETFRF1Q6IPR1 90 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 BTLAQ7Z6A9 289 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TMCO2Q7Z6W1 182 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 STX12Q86Y82 276 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms