RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 PCDHB9Q9Y5E1 797 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 PKD1L2Q7Z442 2459 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 KNTC1P50748 2209 aa12.29□□□□□ -0.44
CHFR-208ENST00000511001 CXorf51AA0A1B0GTR3 108 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 SYCE3A1L190 88 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 FAM221BA6H8Z2 402 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 TMCO5BA8MYB1 307 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 KPNA3O00505 521 aaPredicted RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 DDX3XO00571 662 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHFR-208ENST00000511001 ATMINO43313 823 aaPredicted RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 DKK1O94907 266 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 TRIM16O95361 564 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 PRNPP04156 253 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 PBX1P40424 430 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 CCNHP51946 323 aaPredicted RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 C21orf59P57076 290 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 NXPH1P58417 271 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 IL9RQ01113 521 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 MAMLD1Q13495 774 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 ASIC2Q16515 512 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 KLHL40Q2TBA0 621 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 PLEKHA7Q6IQ23 1121 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 SCYL2Q6P3W7 929 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 SPATS2Q86XZ4 545 aaKnown RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 ARFGAP1Q8N6T3 406 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 PNPLA1Q8N8W4 532 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 GRIN3AQ8TCU5 1115 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 RHBDD1Q8TEB9 315 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 ADAMTS14Q8WXS8 1223 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 ELF4Q99607 663 aaPredicted RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 HEPHQ9BQS7 1158 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 KLC2Q9H0B6 622 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 ZFR2Q9UPR6 939 aaKnown RBP12.28□□□□□ -0.44
CHFR-208ENST00000511001 DMTF1Q9Y222 760 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 CA5BQ9Y2D0 317 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 MYLKQ15746 1914 aa12.28□□□□□ -0.44
CHFR-208ENST00000511001 WASH4PA8MWX3 477 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 TLR4O00206 839 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 DFNA5O60443 496 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 RAMP2O60895 175 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 RNGTTO60942 597 aaKnown RBP12.27□□□□□ -0.45
CHFR-208ENST00000511001 GZMAP12544 262 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 GKP32189 559 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 NUDT1P36639 197 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 ETFBP38117 255 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 RECQLP46063 649 aaPredicted RBP12.27□□□□□ -0.45
CHFR-208ENST00000511001 SUZ12Q15022 739 aaKnown RBP12.27□□□□□ -0.45
CHFR-208ENST00000511001 FIGNQ5HY92 759 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 EFHC2Q5JST6 749 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 NEK5Q6P3R8 708 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 DCUN1D2Q6PH85 259 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 ERN2Q76MJ5 926 aaKnown RBP12.27□□□□□ -0.45
CHFR-208ENST00000511001 LUZP1Q86V48 1076 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 PLPP6Q8IY26 295 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 MFSD2AQ8NA29 543 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 TMEM145Q8NBT3 493 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 KLK6Q92876 244 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 ISG20Q96AZ6 181 aaKnown RBP12.27□□□□□ -0.45
CHFR-208ENST00000511001 HDAC8Q9BY41 377 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 EDEM3Q9BZQ6 932 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 TM6SF2Q9BZW4 377 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 MSRB2Q9Y3D2 182 aa12.27□□□□□ -0.45
CHFR-208ENST00000511001 A0A1W2PQU0 124 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 KDELR3O43731 214 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 SERPINC1P01008 464 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 ATXN1LP0C7T5 689 aaKnown RBP12.26□□□□□ -0.45
CHFR-208ENST00000511001 SKILP12757 684 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 ITGB7P26010 798 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 EPHB2P29323 1055 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 GRK6P43250 576 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 RXRGP48443 463 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 DNA2P51530 1060 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 AIF1P55008 147 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 FANCCQ00597 558 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 POLD3Q15054 466 aaPredicted RBP12.26□□□□□ -0.45
CHFR-208ENST00000511001 CA9Q16790 459 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 ZNF284Q2VY69 593 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 TMEM259Q4ZIN3 620 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 SETMARQ53H47 684 aaPredicted RBP12.26□□□□□ -0.45
CHFR-208ENST00000511001 PPP1R2P3Q6NXS1 205 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 LEKR1Q6ZMV7 388 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 CYP4V2Q6ZWL3 525 aaPredicted RBP12.26□□□□□ -0.45
CHFR-208ENST00000511001 PARS2Q7L3T8 475 aaKnown RBP12.26□□□□□ -0.45
CHFR-208ENST00000511001 KANSL1Q7Z3B3 1105 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 TMC6Q7Z403 805 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 HORMAD1Q86X24 394 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 GATAD2AQ86YP4 633 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 SAP25Q8TEE9 199 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 SKA1Q96BD8 255 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 PEBP4Q96S96 227 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 CDC6Q99741 560 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 TRIM7Q9C029 511 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 ERVMER34-1Q9H9K5 563 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 DYRK4Q9NR20 520 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 GDF3Q9NR23 364 aa12.26□□□□□ -0.45
CHFR-208ENST00000511001 PARVAQ9NVD7 372 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms