RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 ZDHHC5Q9C0B5 715 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 PCED1AQ9H1Q7 454 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 TRIT1Q9H3H1 467 aaKnown RBP7.72□□□□□ -1.17
CCSER1-208ENST00000509109 CD248Q9HCU0 757 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 GPATCH2Q9NW75 528 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 ELOVL2Q9NXB9 296 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 THAP10Q9P2Z0 257 aaPredicted RBP7.72□□□□□ -1.17
CCSER1-208ENST00000509109 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCSER1-208ENST00000509109 PLA2G4CQ9UP65 541 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 PCDHB4Q9Y5E5 795 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 PCDHB14Q9Y5E9 798 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCSER1-208ENST00000509109 RAD54BQ9Y620 910 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 NBEAQ8NFP9 2946 aa7.72□□□□□ -1.17
CCSER1-208ENST00000509109 YJEFN3A6XGL0 299 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 E7ENQ6 273 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 CDX4O14627 284 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 MED7O43513 233 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 AFPP02771 609 aaKnown RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 LTFP02788 710 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 EPHX1P07099 455 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 LCP1P13796 627 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 HOXD9P28356 352 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 IL12RB1P42701 662 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 SLC14A1Q13336 389 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 ENPP2Q13822 863 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 ZNF234Q14588 700 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 CNGA2Q16280 664 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 PLEKHG6Q3KR16 790 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 TTC31Q49AM3 519 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 FNDC3BQ53EP0 1204 aaKnown RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 MPP7Q5T2T1 576 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 TTI2Q6NXR4 508 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 ENOSF1Q7L5Y1 443 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 BHLHA9Q7RTU4 235 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 MINDY1Q8N5J2 469 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 UBR7Q8N806 425 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 FRMD1Q8N878 549 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 RBBP8NLQ8NC74 664 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 HJURPQ8NCD3 748 aaPredicted RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 CADM4Q8NFZ8 388 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 UBA3Q8TBC4 463 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 RNF141Q8WVD5 230 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 NELFBQ8WX92 580 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 SIPA1Q96FS4 1042 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 PIWIL1Q96J94 861 aaKnown RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 HSFY1Q96LI6 401 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 SERPINB11Q96P15 392 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 CAPN10Q9HC96 672 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 TMEM74BQ9NUR3 256 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 USP36Q9P275 1121 aaKnown RBP7.71□□□□□ -1.18
CCSER1-208ENST00000509109 DUSP13Q9UII6 198 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 STOML2Q9UJZ1 356 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 MAN1B1Q9UKM7 699 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 ADAMTS9Q9P2N4 1935 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 FAM208BQ5VWN6 2430 aa7.71□□□□□ -1.18
CCSER1-208ENST00000509109 NYNRINQ9P2P1 1898 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 A0A1B0GTW7 788 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TMEM8BA6NDV4 472 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 H0Y626 953 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TULP2O00295 520 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 CAPN9O14815 690 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 MSI1O43347 362 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TRIM16O95361 564 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 CER1O95813 267 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 IGLV3-19P01714 112 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 IGLV3-27P01718 113 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 APOEP02649 317 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 GLI1P08151 1106 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 PABPC1P11940 636 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 NCAM1P13591 858 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 KRT5P13647 590 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 ACADSBP45954 432 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 RGS7P49802 495 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TPMTP51580 245 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 ZBTB16Q05516 673 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 EGR3Q06889 387 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 SEMA3BQ13214 749 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 IL27RAQ6UWB1 636 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 BEND5Q7L4P6 421 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TMPRSS6Q8IU80 811 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TRIM59Q8IWR1 403 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 DEFB124Q8NES8 71 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 OR2T3Q8NH03 318 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 SLC35F5Q8WV83 523 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 ERCC4Q92889 916 aaPredicted RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 AZIN2Q96A70 460 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 FAM149B1Q96BN6 582 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TMA16Q96EY4 203 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 TOE1Q96GM8 510 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 ZNF419Q96HQ0 510 aaPredicted RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 NUP58Q9BVL2 599 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 MKRN2Q9H000 416 aaKnown RBP7.7□□□□□ -1.18
CCSER1-208ENST00000509109 ITM2CQ9NQX7 267 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 SFMBT1Q9UHJ3 866 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 GGA2Q9UJY4 613 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 LAMA5O15230 3695 aa7.7□□□□□ -1.18
CCSER1-208ENST00000509109 SHISA3A0PJX4 238 aa7.69□□□□□ -1.18
CCSER1-208ENST00000509109 WASH3PC4AMC7 463 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms