RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 SIX6OS1Q8N1H7 587 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 OR56B2PQ8NGI1 322 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SETD6Q8TBK2 473 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 HASPINQ8TF76 798 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GAB3Q8WWW8 586 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CEP295NLQ96MC4 621 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CMTM3Q96MX0 182 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM111AQ96PZ2 611 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 PIP5K1AQ99755 562 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC39A3Q9BRY0 314 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SYT17Q9BSW7 474 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TUBB2BQ9BVA1 445 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TRIM7Q9C029 511 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TTYH1Q9H313 450 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 HEYLQ9NQ87 328 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GLRX2Q9NS18 164 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 GIMAP4Q9NUV9 329 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SH3BP4Q9P0V3 963 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 HMG20BQ9P0W2 317 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 RGS17Q9UGC6 210 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 TRAF3IP3Q9Y228 551 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 RPH3AQ9Y2J0 694 aaPredicted RBP4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 ASB3Q9Y575 518 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 KCNE2Q9Y6J6 123 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 COX11Q9Y6N1 276 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 CLCA3PQ9Y6N3 262 aa4.47□□□□□ -1.69
SMARCA5-202ENST00000508573 SPATA31A6Q5VVP1 1343 aa4.46□□□□□ -1.69
SMARCA5-202ENST00000508573 MBD3L4A6NDZ8 208 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 MBD3L3A6NE82 208 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 OR6C76A6NM76 312 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 F2RL2O00254 374 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TSPAN4O14817 238 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 MAGEB3O15480 346 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 LARGE1O95461 756 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 FDPSP14324 419 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 ARF4P18085 180 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 SAT1P21673 171 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PTPN3P26045 913 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 KLRC1P26715 233 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 RPA1P27694 616 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 SERPINA4P29622 427 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PLA2G5P39877 138 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 MAGEA4P43358 317 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 AVPR1BP47901 424 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PTH2RP49190 550 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 DHPSP49366 369 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CENPAP49450 140 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 DIO1P49895 249 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CASP9P55211 416 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 YPEL5P62699 121 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TUBB4BP68371 445 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CETN1Q12798 172 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 NPRL3Q12980 569 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PDCLQ13371 301 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PTK6Q13882 451 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 HABP2Q14520 560 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 RAB39AQ14964 217 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CLCA4Q14CN2 919 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 RPS6KA2Q15349 733 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 HSP90AA5PQ58FG0 334 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 STXBP5Q5T5C0 1151 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 DCAF12L1Q5VU92 463 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 NCEH1Q6PIU2 408 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TMEM270Q6UE05 265 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CHST9Q7L1S5 443 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 GDF7Q7Z4P5 450 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 GLCCI1Q86VQ1 547 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 UNC5CLQ8IV45 518 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CCDC105Q8IYK2 499 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 GPR156Q8NFN8 814 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PRPF31Q8WWY3 499 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 MRPS27Q92552 414 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PRCCQ92733 491 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CORO2AQ92828 525 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 RAB7BQ96AH8 199 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TMX3Q96JJ7 454 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 SH3GL2Q99962 352 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 FAM118BQ9BPY3 351 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 LZTS2Q9BRK4 669 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CCDC94Q9BW85 323 aaPredicted RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 PACSIN1Q9BY11 444 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 MTMR12Q9C0I1 747 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 ABCG8Q9H221 673 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TAOK3Q9H2K8 898 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 VCPKMTQ9H867 229 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 VEZTQ9HBM0 779 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 DDX4Q9NQI0 724 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 POLE3Q9NRF9 147 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TMEM51Q9NW97 253 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 NMRK1Q9NWW6 199 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 LIMA1Q9UHB6 759 aaKnown RBP4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 TUBE1Q9UJT0 475 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 SARDHQ9UL12 918 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 CA14Q9ULX7 337 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 WDR37Q9Y2I8 494 aa4.46□□□□□ -1.7
SMARCA5-202ENST00000508573 KPNA7A9QM74 516 aa4.45□□□□□ -1.7
SMARCA5-202ENST00000508573 PRR5-ARHGAP8B1AHC4 643 aa4.45□□□□□ -1.7
SMARCA5-202ENST00000508573 PEX12O00623 359 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms