RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TRIM74Q86UV6 250 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRIM73Q86UV7 250 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 BBS5Q8N3I7 341 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 DCLK2Q8N568 766 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF781Q8N8C0 355 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 C1orf127Q8N9H9 656 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ANKRD52Q8NB46 1076 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZSCAN1Q8NBB4 408 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF280CQ8ND82 737 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 REPS2Q8NFH8 660 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF420Q8TAQ5 688 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 FNDC8Q8TC99 324 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 GAB3Q8WWW8 586 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 NANOS1Q8WY41 292 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 BORCS5Q969J3 196 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF669Q96BR6 464 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RCN3Q96D15 328 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PGBD4Q96DM1 585 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 POM121Q96HA1 1249 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SCYL1Q96KG9 808 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PLEKHG4BQ96PX9 1271 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TSPAN18Q96SJ8 248 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 MMP19Q99542 508 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACE2Q9BYF1 805 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 YTHDF1Q9BYJ9 559 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC2A11Q9BYW1 496 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SENP6Q9GZR1 1112 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZCWPW1Q9H0M4 648 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TRPV6Q9H1D0 765 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CDT1Q9H211 546 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RNPEPQ9H4A4 650 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 TASP1Q9H6P5 420 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 COPS7BQ9H9Q2 264 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBTB26Q9HCK0 441 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PALMDQ9NP74 551 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 GPATCH2LQ9NWQ4 482 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 UBAP1Q9NZ09 502 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 DTLQ9NZJ0 730 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 IPO11Q9UI26 975 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SIX4Q9UIU6 781 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 APPL1Q9UKG1 709 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF214Q9UL59 606 aaPredicted RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 VANGL2Q9ULK5 521 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 PAIP2BQ9ULR5 123 aaKnown RBP5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 STAP1Q9ULZ2 295 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 SH3GLB1Q9Y371 365 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 RIPK3Q9Y572 518 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 CEPT1Q9Y6K0 416 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 LTBP4Q8N2S1 1624 aa5.04□□□□□ -1.6
HMGB3P16-201ENST00000508037 A0A087X1B8 175 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 KANSL1LA0AUZ9 987 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SH3PXD2BA1X283 911 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 FAM155AB1AL88 458 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 H3BNH8 94 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ACOT8O14734 319 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PAPSS1O43252 624 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 GRAP2O75791 330 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SRP72O76094 671 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 VAPBO95292 243 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PIGNO95427 931 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PRKCGP05129 697 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 EDN1P05305 212 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 C2P06681 752 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 MYL3P08590 195 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 NFICP08651 508 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ERVK-10P10266 1014 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 FCGR1AP12314 374 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 XRCC1P18887 633 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 UBA1P22314 1058 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 RPS12P25398 132 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TPP2P29144 1249 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC5A2P31639 672 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 TCF7P36402 384 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 GRIA4P48058 902 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 HCAR3P49019 387 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ATP4BP51164 291 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DNAJB13P59910 316 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 STX1BP61266 288 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PSME3P61289 254 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 OSTNP61366 133 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 RHDQ02161 417 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CEACAM7Q14002 265 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 INPP5AQ14642 412 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPP2R5DQ14738 602 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PAFAH1B3Q15102 231 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CYTH1Q15438 398 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 CA9Q16790 459 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 LSM12Q3MHD2 195 aaKnown RBP5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 DCAF4L1Q3SXM0 396 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZBED5Q49AG3 693 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 PPM1JQ5JR12 505 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 ZNF484Q5JVG2 852 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 C6orf52Q5T4I8 152 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 SH3PXD2AQ5TCZ1 1133 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 VWA5B1Q5TIE3 1220 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 BSPRYQ5W0U4 402 aa5.03□□□□□ -1.6
HMGB3P16-201ENST00000508037 NCBP2-AS2Q69YL0 99 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms