RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 HOXC9P31274 260 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 CPA2P48052 419 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SNX16P57768 344 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 EIF4A1P60842 406 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ID2Q02363 134 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SLC14A1Q13336 389 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 STIM1Q13586 685 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ERV3-1Q14264 604 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SMC1AQ14683 1233 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 KPNB1Q14974 876 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TAF7Q15545 349 aaPredicted RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 NPY5RQ15761 445 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TIGD6Q17RP2 521 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 MTHFSDQ2M296 383 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TTC31Q49AM3 519 aaPredicted RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 PLAG1Q6DJT9 500 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ANO7Q6IWH7 933 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 LIN54Q6MZP7 749 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 PLBD1Q6P4A8 553 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ANKRD13BQ86YJ7 626 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ERC1Q8IUD2 1116 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TEX11Q8IYF3 940 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 C12orf76Q8N812 135 aaPredicted RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 CCDC191Q8NCU4 936 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 THAP4Q8WY91 577 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SYAP1Q96A49 352 aaPredicted RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 IQCDQ96DY2 449 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 WDYHV1Q96HA8 205 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SLF1Q9BQI6 1058 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 THUMPD2Q9BTF0 503 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SCNM1Q9BWG6 230 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ADGRE3Q9BY15 652 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 AGXT2Q9BYV1 514 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TXLNGYQ9BZA5 131 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ARHGAP39Q9C0H5 1083 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 DHX36Q9H2U1 1008 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 GHITMQ9H3K2 345 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 ZWILCHQ9H900 591 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TMEM8AQ9HCN3 771 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 KRT84Q9NSB2 600 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TBC1D29Q9UFV1 150 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SRP68Q9UHB9 627 aaKnown RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 VPS28Q9UK41 221 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 RIMKLBQ9ULI2 386 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 SLC27A6Q9Y2P4 619 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 HEMK1Q9Y5R4 338 aaPredicted RBP4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 TTC41PQ6P2S7 1318 aa4.63□□□□□ -1.67
CALCOCO2-208ENST00000506971 MRC1P22897 1456 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 TRIM64A6NGJ6 449 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 TRIM64BA6NI03 449 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CLCA1A8K7I4 914 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 PROB1E7EW31 1015 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 HIP1O00291 1037 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 DOK2O60496 412 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 FAM155BO75949 473 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 APOA4P06727 396 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 TMEM191BP0C7N4 346 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 UBTFL1P0CB47 393 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 PRF1P14222 555 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 IDEP14735 1019 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 IL1R1P14778 569 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MX1P20591 662 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MUTP22033 750 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 ADRA1DP25100 572 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 TACR3P29371 465 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MCM5P33992 734 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 POLE2P56282 527 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 ARF3P61204 181 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 HTRA4P83105 476 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 ARF1P84077 181 aaKnown RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CFHR3Q02985 330 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 UBE3AQ05086 875 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CCDC15Q0P6D6 951 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CCDC173Q0VFZ6 552 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CDC16Q13042 620 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MTX1Q13505 466 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 SEC23BQ15437 767 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 ST3GAL2Q16842 350 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MEX3CQ5U5Q3 659 aaKnown RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 IRF2BP2Q7Z5L9 587 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 VSIG1Q86XK7 387 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 GALNT13Q8IUC8 556 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 HERC6Q8IVU3 1022 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 ARL10Q8N8L6 244 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 APPL2Q8NEU8 664 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 C16orf52Q8NHV5 167 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 OTUD7AQ8TE49 926 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 IP6K1Q92551 441 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 RUBCNQ92622 972 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CCDC47Q96A33 483 aaKnown RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 NSUN4Q96CB9 384 aaKnown RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CTHRC1Q96CG8 243 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 EID2BQ96D98 161 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 TRIM44Q96DX7 344 aaPredicted RBP4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 LRRC46Q96FV0 321 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 HIC2Q96JB3 615 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 SPATA17Q96L03 361 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 SNX22Q96L94 193 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 MEIS3Q99687 375 aa4.62□□□□□ -1.67
CALCOCO2-208ENST00000506971 CINPQ9BW66 212 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms